HHsearch alignment for GI: 254780611 and conserved domain: PRK09047

>PRK09047 RNA polymerase factor sigma-70; Validated.
Probab=99.42  E-value=1.3e-11  Score=97.22  Aligned_cols=69  Identities=16%  Similarity=0.311  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             66666677799999962199999999999827888889899999977899999999999999999999974
Q gi|254780611|r  217 EKEERKNRRNMLTRSMSVLNPRERRIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQESIQKQ  287 (302)
Q Consensus       217 e~~e~~~~~~~L~~~l~~L~~rEr~II~~ry~~~~~~Tl~EIa~~lgiS~eRVrQI~~~AL~kLR~~l~~~  287 (302)
T Consensus        89 ~~~~~~e~~~~l~~ai~~Lp~~qR~vl~L~~~eg--ls~~EIA~~l~is~~tVk~~l~RAr~~Lr~~Le~~  157 (161)
T PRK09047         89 DRLERAQVLQLIEEAIQKLPARQREAFLLRYWED--MDVAETAAAMGCSEGSVKTHCSRATHTLAKALEAK  157 (161)
T ss_pred             HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC--CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999999999999819999999989999987--79999999989699999999999999999999986