HHsearch alignment for GI: 254780611 and conserved domain: PRK10100

>PRK10100 DNA-binding transcriptional regulator CsgD; Provisional.
Probab=96.12  E-value=0.021  Score=35.62  Aligned_cols=45  Identities=22%  Similarity=0.330  Sum_probs=37.8

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf             199999999999827888889899999977899999999999999999
Q gi|254780611|r  234 VLNPRERRIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQ  281 (302)
Q Consensus       234 ~L~~rEr~II~~ry~~~~~~Tl~EIa~~lgiS~eRVrQI~~~AL~kLR  281 (302)
T Consensus       155 ~LT~RE~eIL~lla---~G~sNkEIA~~L~iSe~TVk~H~~~I~~KL~  199 (216)
T PRK10100        155 LLTHREKEILNKLR---IGASNNEIARSLFISENTVKTHLYNLFKKIA  199 (216)
T ss_pred             CCCHHHHHHHHHHH---CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
T ss_conf             99989999999998---7999999998949889899999999999809