HHsearch alignment for GI: 254780611 and conserved domain: PRK10100
>PRK10100 DNA-binding transcriptional regulator CsgD; Provisional.
Probab=96.12 E-value=0.021 Score=35.62 Aligned_cols=45 Identities=22% Similarity=0.330 Sum_probs=37.8
Q ss_pred CCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 199999999999827888889899999977899999999999999999
Q gi|254780611|r 234 VLNPRERRIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQ 281 (302)
Q Consensus 234 ~L~~rEr~II~~ry~~~~~~Tl~EIa~~lgiS~eRVrQI~~~AL~kLR 281 (302)
T Consensus 155 ~LT~RE~eIL~lla---~G~sNkEIA~~L~iSe~TVk~H~~~I~~KL~ 199 (216)
T PRK10100 155 LLTHREKEILNKLR---IGASNNEIARSLFISENTVKTHLYNLFKKIA 199 (216)
T ss_pred CCCHHHHHHHHHHH---CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
T ss_conf 99989999999998---7999999998949889899999999999809