HHsearch alignment for GI: 254780611 and conserved domain: PRK10403
>PRK10403 transcriptional regulator NarP; Provisional.
Probab=96.84 E-value=0.0041 Score=40.34 Aligned_cols=47 Identities=19% Similarity=0.288 Sum_probs=39.6
Q ss_pred HCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 21999999999998278888898999999778999999999999999999
Q gi|254780611|r 233 SVLNPRERRIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQE 282 (302)
Q Consensus 233 ~~L~~rEr~II~~ry~~~~~~Tl~EIa~~lgiS~eRVrQI~~~AL~kLR~ 282 (302)
T Consensus 152 ~~LT~RE~eVL~lla---~G~snkeIA~~L~iS~~TV~~h~~~I~~KLgv 198 (215)
T PRK10403 152 SVLTERELDVLHELA---QGLSNKQIASVLNISEQTVKVHIRNLLRKLNV 198 (215)
T ss_pred CCCCHHHHHHHHHHH---CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC
T ss_conf 568999999999998---69999999999798299999999999998689