HHsearch alignment for GI: 254780611 and conserved domain: cd00092

>cd00092 HTH_CRP helix_turn_helix, cAMP Regulatory protein C-terminus; DNA binding domain of prokaryotic regulatory proteins belonging to the catabolite activator protein family.

Probab=90.29  E-value=0.43  Score=26.83  Aligned_cols=29  Identities=24%  Similarity=0.494  Sum_probs=23.4

Q ss_pred             CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             888898999999778999999999999999999
Q gi|254780611|r  250 ENPVTLENLSSEFEVSRERVRQIEARAFKKVQE  282 (302)
Q Consensus       250 ~~~~Tl~EIa~~lgiS~eRVrQI~~~AL~kLR~  282 (302)
T Consensus        23 ~l~ltr~eiA~~lG~t~eTVsR~----l~~l~~   51 (67)
T cd00092          23 QLPLTRQEIADYLGLTRETVSRT----LKELEE   51 (67)
T ss_pred             ECCCCHHHHHHHHCCCHHHHHHH----HHHHHH
T ss_conf             61779999999978909999999----999998