HHsearch alignment for GI: 254780611 and conserved domain: pfam00140
>pfam00140 Sigma70_r1_2 Sigma-70 factor, region 1.2.
Probab=98.07 E-value=4e-06 Score=60.49 Aligned_cols=36 Identities=36% Similarity=0.574 Sum_probs=32.8
Q ss_pred CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHH
Q ss_conf 4059999998407999998999999999998285999
Q gi|254780611|r 13 EIGLSRYIHEIRKIPMLEKQEEYVLAKRYREHGDLSA 49 (302)
Q Consensus 13 ~~~~~~yl~~i~~~~~Lt~eee~~l~~~~~~~gd~~A 49 (302)
T Consensus 1 ~D~v~~YL~eIg~~pLLt~eEEi~LA~~i~~-g~~~~ 36 (37)
T pfam00140 1 SDSVRLYLREIGRVPLLTAEEEVELARRIEA-GDELA 36 (37)
T ss_pred CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH-CCHHH
T ss_conf 9709999998377678998999999999981-63731