HHsearch alignment for GI: 254780611 and conserved domain: pfam01371

>pfam01371 Trp_repressor Trp repressor protein. This protein binds to tryptophan and represses transcription of the Trp operon.
Probab=92.69  E-value=0.53  Score=26.23  Aligned_cols=44  Identities=20%  Similarity=0.358  Sum_probs=32.3

Q ss_pred             CCCHHHHHHHHHHH-----CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             19999999999982-----7888889899999977899999999999999
Q gi|254780611|r  234 VLNPRERRIFEARR-----LQENPVTLENLSSEFEVSRERVRQIEARAFK  278 (302)
Q Consensus       234 ~L~~rEr~II~~ry-----~~~~~~Tl~EIa~~lgiS~eRVrQI~~~AL~  278 (302)
T Consensus        26 l~T~~E~~ala~R~~va~~LL~~~~syreI~~~~g~S~aTItRv-sr~Lk   74 (88)
T pfam01371        26 LLTPDEREALAQRLRIAKELLRGELSQREIAQELGASIATITRG-SNCLK   74 (88)
T ss_pred             HCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH-HHHHH
T ss_conf             39999999999999999999978998999999859852314788-99987