HHsearch alignment for GI: 254780611 and conserved domain: pfam01371
>pfam01371 Trp_repressor Trp repressor protein. This protein binds to tryptophan and represses transcription of the Trp operon.
Probab=92.69 E-value=0.53 Score=26.23 Aligned_cols=44 Identities=20% Similarity=0.358 Sum_probs=32.3
Q ss_pred CCCHHHHHHHHHHH-----CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 19999999999982-----7888889899999977899999999999999
Q gi|254780611|r 234 VLNPRERRIFEARR-----LQENPVTLENLSSEFEVSRERVRQIEARAFK 278 (302)
Q Consensus 234 ~L~~rEr~II~~ry-----~~~~~~Tl~EIa~~lgiS~eRVrQI~~~AL~ 278 (302)
T Consensus 26 l~T~~E~~ala~R~~va~~LL~~~~syreI~~~~g~S~aTItRv-sr~Lk 74 (88)
T pfam01371 26 LLTPDEREALAQRLRIAKELLRGELSQREIAQELGASIATITRG-SNCLK 74 (88)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH-HHHHH
T ss_conf 39999999999999999999978998999999859852314788-99987