HHsearch alignment for GI: 254780611 and conserved domain: pfam04967

>pfam04967 HTH_10 HTH DNA binding domain.
Probab=96.67  E-value=0.0079  Score=38.43  Aligned_cols=46  Identities=30%  Similarity=0.416  Sum_probs=36.8

Q ss_pred             CCHHHHHHHHHHH--C-CCCC--CCHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             9999999999982--7-8888--8989999997789999999999999999
Q gi|254780611|r  235 LNPRERRIFEARR--L-QENP--VTLENLSSEFEVSRERVRQIEARAFKKV  280 (302)
Q Consensus       235 L~~rEr~II~~ry--~-~~~~--~Tl~EIa~~lgiS~eRVrQI~~~AL~kL  280 (302)
T Consensus         1 LT~rQ~evl~~A~~~GYfd~PR~~~l~elA~~lgis~sT~~~hLr~ae~ki   51 (53)
T pfam04967         1 LTDRQREILRLAYKMGYFDYPRRVTLKDLAKELGISKSTLSEHLRRAESKL   51 (53)
T ss_pred             CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             988999999999986897788768899999996989999999999999987