HHsearch alignment for GI: 254780611 and conserved domain: pfam04967
>pfam04967 HTH_10 HTH DNA binding domain.
Probab=96.67 E-value=0.0079 Score=38.43 Aligned_cols=46 Identities=30% Similarity=0.416 Sum_probs=36.8
Q ss_pred CCHHHHHHHHHHH--C-CCCC--CCHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 9999999999982--7-8888--8989999997789999999999999999
Q gi|254780611|r 235 LNPRERRIFEARR--L-QENP--VTLENLSSEFEVSRERVRQIEARAFKKV 280 (302)
Q Consensus 235 L~~rEr~II~~ry--~-~~~~--~Tl~EIa~~lgiS~eRVrQI~~~AL~kL 280 (302)
T Consensus 1 LT~rQ~evl~~A~~~GYfd~PR~~~l~elA~~lgis~sT~~~hLr~ae~ki 51 (53)
T pfam04967 1 LTDRQREILRLAYKMGYFDYPRRVTLKDLAKELGISKSTLSEHLRRAESKL 51 (53)
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 988999999999986897788768899999996989999999999999987