BLAST/PSIBLAST alignment of GI: 254780611 and GI: 222086841 at iteration 1
>gi|222086841|ref|YP_002545375.1| alternative sigma factor RpoH [Agrobacterium radiobacter K84] Length = 302
>gi|221724289|gb|ACM27445.1| alternative sigma factor RpoH [Agrobacterium radiobacter K84] Length = 302
Score = 448 bits (1153), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/288 (75%), Positives = 242/288 (84%)
Query: 1 MNRKNMSIIVNGEIGLSRYIHEIRKIPMLEKQEEYVLAKRYREHGDLSAAHRLVTSHLRL 60
M R + I GE GL+RY+ EIRK PMLE QEEY+LAKRY EH D AAHRLVTSHLRL
Sbjct: 1 MARNTLPSIAAGEAGLNRYLDEIRKFPMLEPQEEYMLAKRYAEHADREAAHRLVTSHLRL 60
Query: 61 VVKIAMGYRGYGLPISEVVSEGNIGLMQAVKKFDPERGFRLATYSMWWIKAAMQEYILRS 120
V KIAMGYRGYGLPI EVVSEGN+GLMQAVKKFDPERGFRLATY+MWWIKA++QEYILRS
Sbjct: 61 VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS 120
Query: 121 WSLVKIGTTANQKRLFFNLRRLKGHLQAITDNNLKPEQVVAIAKKLNVSESEVISMNCRL 180
WSLVK+GTTANQKRLFFNLRRLKG +QAI + +LKPE V IA KL VSE EVISMN RL
Sbjct: 121 WSLVKMGTTANQKRLFFNLRRLKGRIQAIDEGDLKPEHVSEIATKLKVSEEEVISMNRRL 180
Query: 181 AGDESLNALINSSDKNSSQWQDWLVYDHDGQEQVLIEKEERKNRRNMLTRSMSVLNPRER 240
+GD SLNA I +S+ S QWQDWLV DH+ QE VLIE++E RR ML R+MSVLN RER
Sbjct: 181 SGDASLNAPIKASEGESGQWQDWLVDDHESQEAVLIEQDELDTRRRMLARAMSVLNDRER 240
Query: 241 RIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQESIQKQV 288
RIFEARRL E+PVTLE+LSSEF++SRERVRQIE RAF+KVQE++QK
Sbjct: 241 RIFEARRLSEDPVTLEDLSSEFDISRERVRQIEVRAFEKVQEAVQKDA 288