BLAST/PSIBLAST alignment of GI: 254780611 and GI: 222086841 at iteration 1
>gi|222086841|ref|YP_002545375.1| alternative sigma factor RpoH [Agrobacterium radiobacter K84] Length = 302
>gi|221724289|gb|ACM27445.1| alternative sigma factor RpoH [Agrobacterium radiobacter K84] Length = 302
 Score =  448 bits (1153), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 216/288 (75%), Positives = 242/288 (84%)

Query: 1   MNRKNMSIIVNGEIGLSRYIHEIRKIPMLEKQEEYVLAKRYREHGDLSAAHRLVTSHLRL 60
           M R  +  I  GE GL+RY+ EIRK PMLE QEEY+LAKRY EH D  AAHRLVTSHLRL
Sbjct: 1   MARNTLPSIAAGEAGLNRYLDEIRKFPMLEPQEEYMLAKRYAEHADREAAHRLVTSHLRL 60

Query: 61  VVKIAMGYRGYGLPISEVVSEGNIGLMQAVKKFDPERGFRLATYSMWWIKAAMQEYILRS 120
           V KIAMGYRGYGLPI EVVSEGN+GLMQAVKKFDPERGFRLATY+MWWIKA++QEYILRS
Sbjct: 61  VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS 120

Query: 121 WSLVKIGTTANQKRLFFNLRRLKGHLQAITDNNLKPEQVVAIAKKLNVSESEVISMNCRL 180
           WSLVK+GTTANQKRLFFNLRRLKG +QAI + +LKPE V  IA KL VSE EVISMN RL
Sbjct: 121 WSLVKMGTTANQKRLFFNLRRLKGRIQAIDEGDLKPEHVSEIATKLKVSEEEVISMNRRL 180

Query: 181 AGDESLNALINSSDKNSSQWQDWLVYDHDGQEQVLIEKEERKNRRNMLTRSMSVLNPRER 240
           +GD SLNA I +S+  S QWQDWLV DH+ QE VLIE++E   RR ML R+MSVLN RER
Sbjct: 181 SGDASLNAPIKASEGESGQWQDWLVDDHESQEAVLIEQDELDTRRRMLARAMSVLNDRER 240

Query: 241 RIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQESIQKQV 288
           RIFEARRL E+PVTLE+LSSEF++SRERVRQIE RAF+KVQE++QK  
Sbjct: 241 RIFEARRLSEDPVTLEDLSSEFDISRERVRQIEVRAFEKVQEAVQKDA 288