RPSBLAST alignment for GI: 254780611 and conserved domain: TIGR02835
>gnl|CDD|131882 TIGR02835, spore_sigmaE, RNA polymerase sigma-E factor. Members of this family comprise the Firmicutes lineage endospore formation-specific sigma factor SigE, also called SpoIIGB and sigma-29. As characterized in Bacillus subtilis, this protein is synthesized as a precursor, specifically in the mother cell compartment, and must cleaved by the SpoIIGA protein to be made active. Length = 234
Score = 63.3 bits (154), Expect = 7e-11
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 21 HEIRKIPMLEKQEEYVLAKRYREHGDLSAAHRLVTSHLRLVVKIAMGYRGYGLPISEVVS 80
E P+ ++EE +L K GD SA L+ +LRLVV IA + G+ I ++VS
Sbjct: 27 SEALPPPLTGEEEEALLQKL--TQGDESAKSTLIERNLRLVVYIARKFENTGIGIEDLVS 84
Query: 81 EGNIGLMQAVKKFDPERGFRLATYSMWWIKAAMQEYILRS 120
G IGL++AV F+P + +LATY+ I+ + Y+ R+
Sbjct: 85 IGTIGLIKAVNTFNPSKKIKLATYASRCIENEILMYLRRN 124