RPSBLAST alignment for GI: 254780611 and conserved domain: PRK06986
>gnl|CDD|180784 PRK06986, fliA, flagellar biosynthesis sigma factor; Validated. Length = 236
Score = 38.7 bits (91), Expect = 0.002
Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 40/251 (15%)
Query: 51 HRLVTSHLRLVVKIAMGYRGYGLPIS----EVVSEGNIGLMQAVKKFDPERGFRLATYSM 106
LV + LV +IA+ + LP S +++ G IGL++A +++D E+G TY+
Sbjct: 11 DELVEQYAPLVKRIALRLKAR-LPASVDLDDLIQAGMIGLLEAARRYDGEQGASFETYAG 69
Query: 107 WWIKAAMQEYILRSWSLVKIGTTANQKRLFFNLRRLKGHLQ-AITDNNLKPEQVVAIAKK 165
I+ AM + LRS V N + + +R+L+ L TD +A+K
Sbjct: 70 QRIRGAMLDE-LRSLDWVPRSVRRNAREVAQAIRQLEQELGREPTDTE--------VAEK 120
Query: 166 LNVSESEVISMNCRLAGDESLNALINSS----DKNSSQWQDWLVYDHDGQEQVLIEKEER 221
L +S E M L S D+ + D ++ D Q++ +++ E
Sbjct: 121 LGLSLEEYREM---------LLDTNISQLFSIDELRGEHGDSILVTEDHQDEDPLQQLED 171
Query: 222 KNRRNMLTRSMSVLNPRERRI-----FEARRLQENPVTLENLSSEFEVSRERVRQIEARA 276
+ R L ++ L RE+ + E L+E L VS RV QI ++A
Sbjct: 172 EELREALVEAIESLPEREQLVLSLYYQEELNLKEIGAVL-------GVSESRVSQIHSQA 224
Query: 277 FKKVQESIQKQ 287
K+++ + +
Sbjct: 225 IKRLRARLGEW 235