RPSBLAST alignment for GI: 254780611 and conserved domain: PRK07408
>gnl|CDD|180965 PRK07408, PRK07408, RNA polymerase sigma factor SigF; Reviewed. Length = 256
Score = 44.1 bits (105), Expect = 5e-05
Identities = 57/236 (24%), Positives = 110/236 (46%), Gaps = 32/236 (13%)
Query: 37 LAKRYREHGDLSAAHRLVTSHLRLVVKIAMGY-RGYGLPISEVVSEGNIGLMQAVKKFDP 95
L + Y+++ ++ ++LV +L LV K A + P ++V G++GL++A+++FDP
Sbjct: 14 LLRAYQQNPSIALRNQLVELNLGLVRKEAHRWSNQCSEPYEDLVQVGSLGLIRAIERFDP 73
Query: 96 ERGFRLATYSMWWIKAAMQEYILRSWSLVKIGTTANQKRLFFNL-RRLKGHLQAITDNNL 154
+G +++++ +I+ +Q Y+ V+I R + L R+ K Q +
Sbjct: 74 SKGHAFSSFAIPYIRGEIQHYLRDKSPTVRI------PRRWQELQRQAKKVRQELRQELG 127
Query: 155 KPEQVVAIAKKLNVSESEVISMNCRLAGDE----SLNALINSSDKNSSQWQDWLVYDHDG 210
+ IA+ L++S E +LA SL+A +N + S+ D L+ D
Sbjct: 128 RQPTDQEIAQALDISLEEWQE--IKLALQNRTPLSLDAPVNQDEDGSTSLGD-LLPDPRY 184
Query: 211 QEQVLIEKEERKNRRNMLTRSMSVLNPRERRIFE------------ARRLQENPVT 254
+ L +++ R L ++++ L R R + E A RL +PVT
Sbjct: 185 RSFQLAQED-----RIRLQQALAQLEERTREVLEFVFLHDLTQKEAAERLGISPVT 235