HHsearch alignment for GI: 254780613 and conserved domain: smart00788
>smart00788 Adenylsucc_synt Adenylosuccinate synthetase. Adenylosuccinate synthetase plays an important role in purine biosynthesis, by catalyzing the GTP-dependent conversion of IMP and aspartic acid to AMP. Adenylosuccinate synthetase has been characterized from various sources ranging from Escherichia coli (gene purA) to vertebrate tissues. In vertebrates, two isozymes are present - one involved in purine biosynthesis and the other in the purine nucleotide cycle. The crystal structure of adenylosuccinate synthetase from E. coli reveals that the dominant structural element of each monomer of the homodimer is a central beta-sheet of 10 strands. The first nine strands of the sheet are mutually parallel with right-handed crossover connections between the strands. The 10th strand is antiparallel with respect to the first nine strands. In addition, the enzyme has two antiparallel beta-sheets, comprised of two strands and three strands each, 11 alpha-helices and two short 3/10-helices. Furt
Probab=100.00 E-value=0 Score=1250.09 Aligned_cols=420 Identities=55% Similarity=0.935 Sum_probs=411.5
Q ss_pred EEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCEEEEEEECCCCEECCCCCEEECCCEEECHHHHHHH
Q ss_conf 39999577586760566655315788899957768777659989899998103242035988259779389679999999
Q gi|254780613|r 3 NVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVVRPDKMSIIGSSVVVDPHAFISE 82 (432)
Q Consensus 3 ~~vVvG~qwGDEGKGkivd~La~~~d~vvR~~GG~NAGHTVv~~~~~~~~hllPSG~~~p~~~~~ig~GvVidp~~L~~E 82 (432)
T Consensus 1 ~~vVvG~qwGDEGKGKivD~La~~~d~VvR~~GG~NAGHTvv~~g~k~~lhllPSGi~~~~~~~vIG~GvVidp~~L~~E 80 (421)
T smart00788 1 VVVVVGAQWGDEGKGKIVDYLAEKADVVVRFQGGNNAGHTVVVGGKKYKLHLLPSGILNPNKKCVIGNGVVIDPEALFKE 80 (421)
T ss_pred CEEEECCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCEEEECCEEEEEEECCCEECCCCCEEEECCCEEECHHHHHHH
T ss_conf 98998887465875167775505789999906767878689989989999717835137996078779689859999999
Q ss_pred HHHHHHCCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 99999828988811104403320137000787599887620134656763101356777666545677887509899999
Q gi|254780613|r 83 IESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREGALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISK 162 (432)
Q Consensus 83 i~~l~~~Gv~~~~~rL~Is~ra~ii~P~H~~~D~~~E~~rg~~~~~iGTTgrGIGpaY~Dk~~R~giR~~DL~~~~~l~~ 162 (432)
T Consensus 81 i~~L~~~gi~~-~~rL~IS~rahli~P~H~~lD~~~E~~~g~--~~IGTTgrGIGPaY~DK~~R~giR~~DL~~~~~l~~ 157 (421)
T smart00788 81 IDQLEAKGVDV-RDRLFISDRAHLILPYHIALDKLREKARGK--KKIGTTGRGIGPAYEDKVARRGIRVGDLFDEDVFRE 157 (421)
T ss_pred HHHHHHCCCCC-CCCEEECCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCHHHHHHCCCCCCCHHHHCCHHHHHH
T ss_conf 99999628998-548898687444883148888999997388--755666777326664011334552132429888999
Q ss_pred HHHHHHHHHHHHHHH-CCCCCCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHCCEEEEECCCCCEEECCCCCCCCCC
Q ss_conf 999999998888752-3876578899999988888743010202499999884007879998665310101368775334
Q gi|254780613|r 163 KIEQLLLHHNALRRS-FGEKEVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPFVT 241 (432)
Q Consensus 163 kl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~v~d~~~~l~~a~~~g~~ILfEGAQG~lLDid~GtYP~VT 241 (432)
T Consensus 158 kl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~dt~~~l~~a~~~gk~ILfEGAQG~lLDid~GtYP~VT 237 (421)
T smart00788 158 KLEELLDYKNFLLKKLYGAEPVDVEEILEELLEYAERLKPYVVDVSELLNDALKAGKKVLFEGAQGTLLDIDHGTYPYVT 237 (421)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCCCC
T ss_conf 99999999999998634888899999999999999997513625999999999779959995263045504668777746
Q ss_pred CCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 33574310134215587887649999960423237842213566842225343078877864556766654779988999
Q gi|254780613|r 242 SSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEFGTVTNRQRRCGWLDLASVRRSV 321 (432)
Q Consensus 242 SS~T~~~~a~~g~Gi~p~~i~~viGV~KAY~TRVG~GPFPTEl~~~~~~~lr~~g~E~GttTgR~RR~GWlDlv~lkya~ 321 (432)
T Consensus 238 SSnt~~~~a~~g~Gi~p~~i~~viGV~KAY~TRVG~GPFPTEl~~e~g~~lr~~G~E~GttTGRpRR~GW~D~v~lr~a~ 317 (421)
T smart00788 238 SSNTTAGGAATGAGIGPTRIDYVIGVVKAYTTRVGEGPFPTELFDETGEKLRERGHEFGTTTGRPRRCGWFDAVLLRYAV 317 (421)
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCEECCCCCCCCCCCCCCHHHHHHHH
T ss_conf 56753143001678897653329999975303205889962002478999998488326768987404766679999999
Q ss_pred HHCCCCCCEECCCCCCCCCCCCEEEEEEEECCEEEECCCCCHHHHCCCEEEEEECCCCCCCHHCCCCHHHHHHHHHHHHH
Q ss_conf 87487400001002213577621352363188785038999357615777998877888651116698885499999999
Q gi|254780613|r 322 IINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDFLPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIR 401 (432)
Q Consensus 322 ~ing~~~l~lTKlDvL~~~~~ikvC~~Y~~~g~~~~~~P~~~~~~~~~~PvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~ 401 (432)
T Consensus 318 ~ing~~~l~lTKlDvLd~~~~ikiC~~Y~~~G~~~~~~P~~~~~l~~~~PvYe~~~GW~~~~~~~~~~~~LP~~a~~yi~ 397 (421)
T smart00788 318 RINGITGLALTKLDVLDGLDEIKVCVAYKLDGKEIDYFPADLEDLERCEPIYETLPGWKEDTTGVRSYEDLPENAKKYIE 397 (421)
T ss_pred HHCCCCEEEEECCEECCCCCCEEEEEEEEECCEECCCCCCCHHHHHCCEEEEEECCCCCCCCCCCCCHHHCCHHHHHHHH
T ss_conf 97599769887306237998232787886799573558989566723768999828998854057624777899999999
Q ss_pred HHHHHHCCCEEEEEECCCCCEEEE
Q ss_conf 999997895799975698531798
Q gi|254780613|r 402 KIEEVLEVPVALLSIGPERENTLI 425 (432)
Q Consensus 402 ~IE~~~gvpI~~Is~GP~R~~~I~ 425 (432)
T Consensus 398 ~IE~~~gvpi~~Is~GP~R~~~I~ 421 (421)
T smart00788 398 RIEELVGVPVSLISTGPDREQTIV 421 (421)
T ss_pred HHHHHHCCCEEEEECCCCCCCCCC
T ss_conf 999998999899961898021229