HHsearch results for GI: 254780613 and protein with PDBid: 1dj2_A
>1dj2_A Adenylosuccinate synthetase; GDP, ligase; HET: GDP; 2.90A {Arabidopsis thaliana} SCOP: c.37.1.10 PDB: 1dj3_A*
Probab=100.00 E-value=0 Score=1198.00 Aligned_cols=423 Identities=39% Similarity=0.712 Sum_probs=411.1
Q ss_pred CC-EEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCEEEE-CCEEEEEEECCCCEECCCCCEEECCCEEECHHH
Q ss_conf 96-3999957758676056665531578889995776877765998-989999810324203598825977938967999
Q gi|254780613|r 1 MT-NVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKV-NDIVYKLSLLPSGVVRPDKMSIIGSSVVVDPHA 78 (432)
Q Consensus 1 M~-~~vVvG~qwGDEGKGkivd~La~~~d~vvR~~GG~NAGHTVv~-~~~~~~~hllPSG~~~p~~~~~ig~GvVidp~~ 78 (432)
|+ ..+|||+|||||||||||||||+++|+|||||||+||||||++ +|++|+|||||||+|+|+++|+||+||||||..
T Consensus 18 ~~~v~~VvG~qwGDEGKGkivD~La~~~d~VvR~~GG~NAGHTVv~~~G~k~~lhliPSGil~~~~~~~ig~GvVidp~~ 97 (443)
T 1dj2_A 18 LSQVSGVLGCQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILNEDTTCVIGNGVVVHLPG 97 (443)
T ss_dssp SCSEEEEEESSSSCSSHHHHHHHHGGGCSEEEECSCCTTCCEEEECSSCCEEEESSSCGGGGSTTCEEEECTTCEECHHH
T ss_pred CCCEEEEEECCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCEEEECCCEEEEEECCCCEECCCCCEEEECCCEEECHHH
T ss_conf 45525998278466761088887634599999906878878379956993999814684760499728989948986999
Q ss_pred HHHHHHHHHHCCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99999999982898881110440332013700078759988762013465676310135677766654567788750989
Q gi|254780613|r 79 FISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREGALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVE 158 (432)
Q Consensus 79 L~~Ei~~l~~~Gv~~~~~rL~Is~ra~ii~P~H~~~D~~~E~~rg~~~~~iGTTgrGIGpaY~Dk~~R~giR~~DL~~~~ 158 (432)
|++|+++|+++|++.. +||+||+||||++|+|+++|+++|+++++ ++||||||||||||+||++|+|||++||++++
T Consensus 98 L~~Ei~~L~~~g~~~~-~~l~Is~~a~li~p~h~~~D~~~E~~~g~--~~iGTTgrGIGPaY~dk~~R~gir~~DL~~~~ 174 (443)
T 1dj2_A 98 LFKEIDGLESNGVSCK-GRILVSDRAHLLFDFHQEVDGLRESELAK--SFIGTTKRGIGPAYSSKVIRNGIRVGDLRHMD 174 (443)
T ss_dssp HHHHHHHHHTTTCCCT-TTEEEESSSEECCHHHHHHHHHHHHHSCS--CCCCCCSCCHHHHHHHHHHTCCCBGGGGGCTT
T ss_pred HHHHHHHHHHCCCCCC-CCEEEECCCCCCCCHHHHHHHHHHHHCCC--CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH
T ss_conf 9999999986288740-12456535530565789989876654078--66475578766999875134664422210056
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHCCEEEEECCCCCEEECCCCCCC
Q ss_conf 99999999999988887523876578899999988888743010202499999884007879998665310101368775
Q gi|254780613|r 159 HISKKIEQLLLHHNALRRSFGEKEVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYP 238 (432)
Q Consensus 159 ~l~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~d~~~~l~~a~~~g~~ILfEGAQG~lLDid~GtYP 238 (432)
.|++|++.++.+++.+++.++..+...++.++++.++.++++||++|+..+++++++++++||||||||+|||+||||||
T Consensus 175 ~l~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~g~~ILfEGAQG~lLDid~GtYP 254 (443)
T 1dj2_A 175 TLPQKLDLLLSDAAARFQGFKYTPEMLREEVEAYKRYADRLEPYITDTVHFINDSISQKKKVLVEGGQATMLDIDFGTYP 254 (443)
T ss_dssp THHHHHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHTTTEECHHHHHHHHHHTTCCEEEEEEEEGGGCTTTSSTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCCEEEECCCEEEEECCCCCCC
T ss_conf 79999999999999986335677042599999999999982223333099999999779947987154168713678466
Q ss_pred CCCCCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 33433574310134215587887649999960423237842213566842225343078877864556766654779988
Q gi|254780613|r 239 FVTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEFGTVTNRQRRCGWLDLASVR 318 (432)
Q Consensus 239 ~VTSS~T~~~~a~~g~Gi~p~~i~~viGV~KAY~TRVG~GPFPTEl~~~~~~~lr~~g~E~GttTgR~RR~GWlDlv~lk 318 (432)
|||||||+++++++|+|++|+.+++|+||+|||+||||+||||||++++.+++||+.|+||||||||||||||||+|++|
T Consensus 255 ~VTSSntta~ga~~g~Gi~p~~i~~viGV~KAY~TRVG~GPFpTEl~~e~~~~lr~~g~E~GttTGRpRR~GW~D~v~lr 334 (443)
T 1dj2_A 255 FVTSSSPSAGGICTGLGIAPSVVGDLIGVVKAYTTRVGSGPFPTENLGTGGDLLRLAGQEFGTTTGRPRRCGWLDIVALK 334 (443)
T ss_dssp SSCSSCCSTHHHHHTTTCCTTTCCCEEEEEESEEEESSSSCCTTBCCSHHHHHHHHHHTCBCTTTCCBCEEEEEEHHHHH
T ss_pred CCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 40027846877775338887631239999985443116888887665112223413211027888875125733399999
Q ss_pred HHHHHCCCCCCEECCCCCCCCCCCCEEEEEEEE-CCEEEECCCCCHHHHCCCEEEEEECCCCCCCHHCCCCHHHHHHHHH
Q ss_conf 999874874000010022135776213523631-8878503899935761577799887788865111669888549999
Q gi|254780613|r 319 RSVIINGVKGIALTKLDVLDGLDELKICVGYRM-DGREVDFLPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQAR 397 (432)
Q Consensus 319 ya~~ing~~~l~lTKlDvL~~~~~ikvC~~Y~~-~g~~~~~~P~~~~~~~~~~PvY~~~~GW~~~~~~~~~~~~LP~~a~ 397 (432)
||+++||+|+|+||||||||+|++||||++|+. ||+.++.||++...+++|+||||+||||+++++++++|++||++||
T Consensus 335 ya~~ing~~~l~lTklDvLd~~~~ikvC~~Y~~~dG~~~~~~P~~~~~~~~~~pvye~~~GW~~~~~~~~~~~~LP~~a~ 414 (443)
T 1dj2_A 335 FSCQINGFASLNLTKLDVLSDLNEIQLGVAYKRSDGTPVKSFPGDLRLLEELHVEYEVLPGWKSDISSVRNYSDLPKAAQ 414 (443)
T ss_dssp HHHHHHTCSEEEEECGGGGGGCSEEEEEEEEECSSSCBCCSCCSCHHHHHHCEEEEEEEECCCSCCTTCCSSTTSCHHHH
T ss_pred HHHHHCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEECCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCHHHCCHHHH
T ss_conf 99985699769997310047988356887777479968114887946744665899977898762116888478669999
Q ss_pred HHHHHHHHHHCCCEEEEEECCCCCEEEEE
Q ss_conf 99999999978957999756985317980
Q gi|254780613|r 398 NYIRKIEEVLEVPVALLSIGPERENTLIM 426 (432)
Q Consensus 398 ~yi~~IE~~~gvpI~~Is~GP~R~~~I~~ 426 (432)
+||++||+++||||++||+||+|+|||++
T Consensus 415 ~yi~~IE~~~g~pv~~is~GP~R~~~I~r 443 (443)
T 1dj2_A 415 QYVERIEELVGVPIHYIGIGPGRDALIYK 443 (443)
T ss_dssp HHHHHHHHHHCSCEEEEECSSSSSCEEEC
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCEEEC
T ss_conf 99999999989998999738895537629