HHSEARCH alignment of GI: 254780613 and SCOP domain: d1qf5a_

Alignment
>d1qf5a_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=1235.06  Aligned_cols=428  Identities=49%  Similarity=0.832  Sum_probs=417.9

Q ss_pred             CEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCEEEEEEECCCCEECCCCCEEECCCEEECHHHHHH
Q ss_conf             63999957758676056665531578889995776877765998989999810324203598825977938967999999
Q gi|254780613|r    2 TNVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVVRPDKMSIIGSSVVVDPHAFIS   81 (432)
Q Consensus         2 ~~~vVvG~qwGDEGKGkivd~La~~~d~vvR~~GG~NAGHTVv~~~~~~~~hllPSG~~~p~~~~~ig~GvVidp~~L~~   81 (432)
                      .++||+|+|||||||||||||||+++|+|||||||+||||||+++++||+|||||||+|+|+++++||+||||||.+|++
T Consensus         2 ~~vvVvG~qwGDEGKGkivD~La~~~d~VvR~~GG~NAGHTVv~~g~~~~lhllPSGil~~~~~~vIG~GvVvdp~~L~~   81 (431)
T d1qf5a_           2 NNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLVINGEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMK   81 (431)
T ss_dssp             CEEEEEESSSSCSSHHHHHHHHGGGCSEEEECSCCTTCCEEEEETTEEEEESSSCTTTTCTTCEEEECTTSCBCHHHHHH
T ss_pred             CEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCEEEECCEEEEEECCCCEECCCCCEEEECCCEEECHHHHHH
T ss_conf             86999757746677207777561679999994786787858998999999953772662699708988978985999999


Q ss_pred             HHHHHHHCCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf             99999982898881110440332013700078759988762013465676310135677766654567788750989999
Q gi|254780613|r   82 EIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREGALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHIS  161 (432)
Q Consensus        82 Ei~~l~~~Gv~~~~~rL~Is~ra~ii~P~H~~~D~~~E~~rg~~~~~iGTTgrGIGpaY~Dk~~R~giR~~DL~~~~~l~  161 (432)
                      |++.|+++|++. .+||+||+|||||+|||+++|+++|++|++  ++||||||||||||+||++|+|||++||++++.|+
T Consensus        82 Ei~~L~~~Gi~~-~~rL~IS~rAhli~P~H~~~D~~~E~~rg~--~~iGTTgrGIGPaY~DK~~R~gir~~DL~~~~~l~  158 (431)
T d1qf5a_          82 EMKELEDRGIPV-RERLLLSEACPLILDYHVALDNAREKARGA--KAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFA  158 (431)
T ss_dssp             HHHHHHTTTCCH-HHHEEECTTCBBCCHHHHHHHHHHHHHHGG--GCCCCCSSSHHHHHHHHHTTCCCBGGGGGCHHHHH
T ss_pred             HHHHHHHCCCCC-HHHCCCCCCCCEECCHHHHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHHCCCCCHHHCCCHHHHH
T ss_conf             999999749972-320166676645351799999999986489--62377887601888856521565000101778899


Q ss_pred             HHHHHHHHHHHHHH-HHCCCCCCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHCCEEEEECCCCCEEECCCCCCCCC
Q ss_conf             99999999988887-52387657889999998888874301020249999988400787999866531010136877533
Q gi|254780613|r  162 KKIEQLLLHHNALR-RSFGEKEVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPFV  240 (432)
Q Consensus       162 ~kl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~v~d~~~~l~~a~~~g~~ILfEGAQG~lLDid~GtYP~V  240 (432)
                      +|++.++.+++.++ +.+...+.+.+++.+++.++.++++++++|+..+|++++++|++||||||||+|||+||||||||
T Consensus       159 ~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~dt~~~l~~a~~~gk~iLfEGAQG~lLDid~GtYP~V  238 (431)
T d1qf5a_         159 EKLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYV  238 (431)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCCCCCHHHHHHHHHTTHHHHHHTBCCHHHHHHHHHHHTCCEEEECCSCGGGCTTTSSTTSS
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCC
T ss_conf             98899998644544302576553256778899999998434200289999999854977998421022110137845432


Q ss_pred             CCCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             43357431013421558788764999996042323784221356684222534307887786455676665477998899
Q gi|254780613|r  241 TSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEFGTVTNRQRRCGWLDLASVRRS  320 (432)
Q Consensus       241 TSS~T~~~~a~~g~Gi~p~~i~~viGV~KAY~TRVG~GPFPTEl~~~~~~~lr~~g~E~GttTgR~RR~GWlDlv~lkya  320 (432)
                      |||||+++++++|+|++|+.+++|+||+|||+||||+||||||++++.+++||+.|+||||||||||||||||+|++|||
T Consensus       239 TSSntt~~~a~~g~Gi~p~~i~~viGV~KAY~TRVG~GPfPTEl~~~~g~~l~~~g~E~GttTGRpRR~GWlD~v~lrya  318 (431)
T d1qf5a_         239 TSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRA  318 (431)
T ss_dssp             CSSCCSTHHHHHTTCCCGGGCCEEEEEEESSEEECSSSCCTTBCCSHHHHHHHHHHTCBCTTTCCBCEEECEEHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             55665202212026888343435999987500013786588655660777766414778864034105772357888888


Q ss_pred             HHHCCCCCCEECCCCCCCCCCCCEEEEEEEE-CCEEEECCCCCHHHHCCCEEEEEECCCCCCCHHCCCCHHHHHHHHHHH
Q ss_conf             9874874000010022135776213523631-887850389993576157779988778886511166988854999999
Q gi|254780613|r  321 VIINGVKGIALTKLDVLDGLDELKICVGYRM-DGREVDFLPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNY  399 (432)
Q Consensus       321 ~~ing~~~l~lTKlDvL~~~~~ikvC~~Y~~-~g~~~~~~P~~~~~~~~~~PvY~~~~GW~~~~~~~~~~~~LP~~a~~y  399 (432)
                      +++||+|+||||||||||+|++||||++|++ +|++++.||++...+++++|||++||||+++++++++|++||+|||+|
T Consensus       319 ~~ing~~~lalTklDvL~~~~~ikvc~~Y~~~~G~~~~~~P~~~~~l~~~~PvY~~~~GW~~~~~~~~~~~~LP~~a~~y  398 (431)
T d1qf5a_         319 VQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNY  398 (431)
T ss_dssp             HHHHTCCEEEEECGGGGTTCSEEEEECEEECTTSCEESSCCSSGGGTTTCEEECCEEECCCSCCTTCCSGGGSCHHHHHH
T ss_pred             HHHCCCCCEEEEEEEECCCCCCCCCCCCEECCCCCEEECCCCCHHHHHCCEEEEEECCCCCCCCCCCCCHHHCCHHHHHH
T ss_conf             87525650478731013666753312312237985650388795677077588998689988100687457858999999


Q ss_pred             HHHHHHHHCCCEEEEEECCCCCEEEEECCCCCC
Q ss_conf             999999978957999756985317980586789
Q gi|254780613|r  400 IRKIEEVLEVPVALLSIGPERENTLIMSNPFED  432 (432)
Q Consensus       400 i~~IE~~~gvpI~~Is~GP~R~~~I~~~~~f~~  432 (432)
                      |++||+++||||++||+||+|+|||+++|||+-
T Consensus       399 i~~iE~~~gvpi~~is~GP~R~~tI~~~~~f~~  431 (431)
T d1qf5a_         399 IKRIEELTGVPIDIISTGPDRTETMILRDPFDA  431 (431)
T ss_dssp             HHHHHHHHSSCEEEEECSSBTTSEEESSCTTTC
T ss_pred             HHHHHHHHCCCEEEEEECCCHHHEEEECCCCCC
T ss_conf             999999989998999868880235862078789


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Adenylosuccinate synthetase, PurA
species: Escherichia coli [TaxId: 562]