RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254780613|ref|YP_003065026.1| adenylosuccinate synthetase
[Candidatus Liberibacter asiaticus str. psy62]
         (432 letters)



>gnl|CDD|179227 PRK01117, PRK01117, adenylosuccinate synthetase; Provisional.
          Length = 430

 Score =  698 bits (1804), Expect = 0.0
 Identities = 233/434 (53%), Positives = 303/434 (69%), Gaps = 6/434 (1%)

Query: 1   MTNVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVV 60
           M NVVVVG QWGDEGKGKIVD LSE ADV+VRFQGG+NAGHTL ++   YKL L+PSG++
Sbjct: 1   MKNVVVVGTQWGDEGKGKIVDLLSERADVVVRFQGGHNAGHTLVIDGKKYKLHLIPSGIL 60

Query: 61  RPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREG 120
           RP K  +IG+ VV+DP A + EI+ L  +G+ V    LRI+  A LIL  HR LD  RE 
Sbjct: 61  RPGKTCVIGNGVVLDPEALLKEIDELEARGVDV-RERLRISERAHLILPYHRALDKAREK 119

Query: 121 ALSPCGAH-IGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNA-LRRSF 178
           A    G   IGTT RGIGPAYED+V RR IRV DL D E  ++K+E+ L + N  L + +
Sbjct: 120 AR---GKKKIGTTGRGIGPAYEDKVARRGIRVGDLLDPETFAEKLEENLEYKNFLLTKYY 176

Query: 179 GEKEVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYP 238
           G + V ++ IL+E +   E++ P++     LL    + G  +LFEGAQG LLD DHGTYP
Sbjct: 177 GAEAVDFEEILDEYLEYAERLKPYVTDTSLLLNDALKAGKRVLFEGAQGTLLDIDHGTYP 236

Query: 239 FVTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKE 298
           FVTSSNT +  A+ GSG+ P  + YVLG+ KAYTTRVG GPFPTEL ++ G+ L+E G E
Sbjct: 237 FVTSSNTTAGGAATGSGVGPTKIDYVLGIAKAYTTRVGSGPFPTELFDEVGEHLRERGHE 296

Query: 299 FGTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDF 358
           FGT T R RRCGW D  ++R +V +NG+ G+ALTKLDVLDGL+E+KICV Y +DG+ +D+
Sbjct: 297 FGTTTGRPRRCGWFDAVALRYAVRVNGLTGLALTKLDVLDGLEEIKICVAYELDGKRIDY 356

Query: 359 LPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGP 418
            P       R EP+Y  L GW +ST G+R F DLP  AR YI++IEE+  VP++++S GP
Sbjct: 357 FPASLEDLARCEPIYEELPGWSESTTGVRSFDDLPENARKYIKRIEELTGVPISIISTGP 416

Query: 419 ERENTLIMSNPFED 432
           +R+ T+I+ +PF  
Sbjct: 417 DRDQTIILRDPFAA 430


>gnl|CDD|129024 smart00788, Adenylsucc_synt, Adenylosuccinate synthetase.
           Adenylosuccinate synthetase plays an important role in
           purine biosynthesis, by catalyzing the GTP-dependent
           conversion of IMP and aspartic acid to AMP.
           Adenylosuccinate synthetase has been characterized from
           various sources ranging from Escherichia coli (gene
           purA) to vertebrate tissues. In vertebrates, two
           isozymes are present - one involved in purine
           biosynthesis and the other in the purine nucleotide
           cycle. The crystal structure of adenylosuccinate
           synthetase from E. coli reveals that the dominant
           structural element of each monomer of the homodimer is a
           central beta-sheet of 10 strands. The first nine strands
           of the sheet are mutually parallel with right-handed
           crossover connections between the strands. The 10th
           strand is antiparallel with respect to the first nine
           strands. In addition, the enzyme has two antiparallel
           beta-sheets, comprised of two strands and three strands
           each, 11 alpha-helices and two short 3/10-helices.
           Further, it has been suggested that the similarities in
           the GTP-binding domains of the synthetase and the p21ras
           protein are an example of convergent evolution of two
           distinct families of GTP-binding proteins
           PUBMED:8244965. Structures of adenylosuccinate
           synthetase from Triticum aestivum and Arabidopsis
           thaliana when compared with the known structures from E.
           coli reveals that the overall fold is very similar to
           that of the E. coli protein PUBMED:10669609.
          Length = 421

 Score =  625 bits (1614), Expect = e-180
 Identities = 233/424 (54%), Positives = 300/424 (70%), Gaps = 4/424 (0%)

Query: 3   NVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVVRP 62
            VVVVG QWGDEGKGKIVD+L+E ADV+VRFQGGNNAGHT+ V    YKL LLPSG++ P
Sbjct: 1   VVVVVGAQWGDEGKGKIVDYLAEKADVVVRFQGGNNAGHTVVVGGKKYKLHLLPSGILNP 60

Query: 63  DKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREGAL 122
           +K  +IG+ VV+DP A   EI+ L  +G+ V  + L I++ A LIL  H  LD LRE A 
Sbjct: 61  NKKCVIGNGVVIDPEALFKEIDQLEAKGVDVR-DRLFISDRAHLILPYHIALDKLREKAR 119

Query: 123 SPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSF-GEK 181
                 IGTT RGIGPAYED+V RR IRV DL D +   +K+E+LL + N L +   G +
Sbjct: 120 G--KKKIGTTGRGIGPAYEDKVARRGIRVGDLFDEDVFREKLEELLDYKNFLLKKLYGAE 177

Query: 182 EVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPFVT 241
            V  + ILEEL+   E++ P++  +  LL    + G  +LFEGAQG LLD DHGTYP+VT
Sbjct: 178 PVDVEEILEELLEYAERLKPYVVDVSELLNDALKAGKKVLFEGAQGTLLDIDHGTYPYVT 237

Query: 242 SSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEFGT 301
           SSNT +  A+ G+GI P  + YV+GVVKAYTTRVG GPFPTEL ++TG+ L+E G EFGT
Sbjct: 238 SSNTTAGGAATGAGIGPTRIDYVIGVVKAYTTRVGEGPFPTELFDETGEKLRERGHEFGT 297

Query: 302 VTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDFLPD 361
            T R RRCGW D   +R +V ING+ G+ALTKLDVLDGLDE+K+CV Y++DG+E+D+ P 
Sbjct: 298 TTGRPRRCGWFDAVLLRYAVRINGITGLALTKLDVLDGLDEIKVCVAYKLDGKEIDYFPA 357

Query: 362 DSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGPERE 421
           D     R EP+Y  L GWK+ T G+R + DLP  A+ YI +IEE++ VPV+L+S GP+RE
Sbjct: 358 DLEDLERCEPIYETLPGWKEDTTGVRSYEDLPENAKKYIERIEELVGVPVSLISTGPDRE 417

Query: 422 NTLI 425
            T++
Sbjct: 418 QTIV 421


>gnl|CDD|161751 TIGR00184, purA, adenylosuccinate synthase.  Alternate name
           IMP--aspartate ligase.
          Length = 425

 Score =  477 bits (1230), Expect = e-135
 Identities = 198/427 (46%), Positives = 271/427 (63%), Gaps = 4/427 (0%)

Query: 5   VVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVVRPDK 64
           VVVG QWGDEGKGKIVD L++  D++ R+QGG+NAGHT+ ++ + Y L L+PSG + PD 
Sbjct: 1   VVVGGQWGDEGKGKIVDLLADKPDIVARYQGGHNAGHTIVIDGVKYGLHLIPSGFLYPDA 60

Query: 65  MSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREGALSP 124
             +IG+ VVVDP   + E+E L  +GI V  + L ++    LIL  H+ LD  RE +   
Sbjct: 61  KLLIGNGVVVDPEVLLKEMEYLEKRGISVR-DRLFVSYRCHLILPYHKKLDKAREKSKL- 118

Query: 125 CGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRS-FGEKEV 183
               IGTT +GIGPAYED+V R  +RV DL D E  ++K + +L + N      + ++ V
Sbjct: 119 -AKKIGTTGKGIGPAYEDKVARSGLRVGDLLDDEAFAEKAKNILEYLNEQLVKYYKDEGV 177

Query: 184 LYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPFVTSS 243
            Y+  L+E M   E++ PF+  +   L     +G  +LFEGAQG +LD D+GTYP+VTSS
Sbjct: 178 DYEKKLDEYMKYAEELKPFVVDVSVELNEALDEGEKVLFEGAQGTMLDIDYGTYPYVTSS 237

Query: 244 NTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEFGTVT 303
           NT +   + G GI P  +  V+GV KAYTTRVG GPFPTEL ++ G+ L   G EFGT T
Sbjct: 238 NTTAGGVATGVGIGPTKVDEVIGVFKAYTTRVGAGPFPTELSDEEGEKLGTKGAEFGTTT 297

Query: 304 NRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDFLPDDS 363
            R+RRCGW DL + R +  +NG   +ALTKLDVLDG+DE+K+CV YRM G  ++  P D 
Sbjct: 298 GRRRRCGWFDLVAARYACRLNGATQLALTKLDVLDGIDEIKVCVAYRMKGEILELFPLDL 357

Query: 364 IYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGPERENT 423
                 EP+Y  L GW +   G+  ++DLP  A+ YI +IEE+  VPV ++S GPERE T
Sbjct: 358 KDLKGVEPIYETLPGWDKECTGVTEYSDLPENAKKYIERIEELTGVPVTIISTGPEREQT 417

Query: 424 LIMSNPF 430
           + +    
Sbjct: 418 IDLRKEL 424


>gnl|CDD|178129 PLN02513, PLN02513, adenylosuccinate synthase.
          Length = 427

 Score =  442 bits (1138), Expect = e-124
 Identities = 183/427 (42%), Positives = 258/427 (60%), Gaps = 9/427 (2%)

Query: 3   NVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDI--VYKLSLLPSGVV 60
              V+G QWGDEGKGK+VD L+++ D++ R QGG NAGHT+  ND    + L L+PSG++
Sbjct: 4   VSAVLGTQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTI-YNDEGKKFALHLVPSGIL 62

Query: 61  RPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREG 120
                 +IG+ VVV       EI+ L   G+      L +++ A L+   H+++D LRE 
Sbjct: 63  NEKTTCVIGNGVVVHLPGLFEEIDGLESNGVSCE-GRLLVSDRAHLLFDFHQEVDGLREA 121

Query: 121 ALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFGE 180
            L+  G+ IGTT+RGIGPAY  +  R  +RV DL  ++  ++K+ +LL    A    F  
Sbjct: 122 ELA--GSKIGTTKRGIGPAYSSKATRNGLRVGDLRHMDTFAEKLRELLADAAARFEGFEY 179

Query: 181 KEVLYKTILEELMYAREKILPFM-DVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPF 239
              + +  +E      E++ PF+ D +   L    + G  IL EGAQ  +LD D GTYPF
Sbjct: 180 DASMVEEEVEAYKKFAERLEPFITDTV-HYLNEAIQAGKKILVEGAQATMLDIDFGTYPF 238

Query: 240 VTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEF 299
           VTSSN  +     G GI+P  LG ++GVVKAYTTRVG GPFPTEL  + GD L+E G+EF
Sbjct: 239 VTSSNPSAGGICTGLGIAPRKLGDIIGVVKAYTTRVGSGPFPTELFGELGDLLREAGQEF 298

Query: 300 GTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRM-DGREVDF 358
           GT T R RRCGWLD+ +++ S  ING   + LTKLDVL GL E+KI V Y+  DG+ V  
Sbjct: 299 GTTTGRPRRCGWLDIVALKYSCQINGFTSLNLTKLDVLSGLPEIKIGVAYKTPDGKVVKS 358

Query: 359 LPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGP 418
            P D     + E VY +L GW++  + +R + DLP  A+ Y+ +IEE++ VPV  + +GP
Sbjct: 359 FPADLDTLEQVEVVYEVLPGWQEDISSVRNYDDLPAAAQAYVERIEELVGVPVHYIGVGP 418

Query: 419 ERENTLI 425
            R+  ++
Sbjct: 419 GRDALIV 425


>gnl|CDD|185572 PTZ00350, PTZ00350, adenylosuccinate synthetase; Provisional.
          Length = 436

 Score =  434 bits (1118), Expect = e-122
 Identities = 182/428 (42%), Positives = 256/428 (59%), Gaps = 14/428 (3%)

Query: 4   VVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVVRPD 63
           VV++G QWGDEGKGK+VD LSE AD++ RF GG NAGHT+ V+   Y L LLP G++ P+
Sbjct: 15  VVILGAQWGDEGKGKLVDILSEKADIVARFNGGANAGHTIVVDGKKYALHLLPCGILYPN 74

Query: 64  KMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREGALS 123
            ++++G+ VV+   + + EIE L  +GI +    L I++ A L+  +H+ +D ++E    
Sbjct: 75  CINVLGNGVVIHLPSLLEEIEQLTKKGINLL-GRLYISDRAHLVFDLHQAIDGIQESEKG 133

Query: 124 PCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFG---E 180
             G  IGTT+RGIGP Y  +  R  +RV DL + E   KK  +L+              E
Sbjct: 134 KGGTQIGTTKRGIGPCYSTKASRTGLRVGDLLNFETFEKKYRKLVEKLQEQYNIEEYDAE 193

Query: 181 KEVLYKTILEELMYAREKILPFM-DVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPF 239
           +E      LE      EK+   + D +   + +  ++G  +L EGA   +LD D GTYP+
Sbjct: 194 EE------LERYKGYAEKLKDMIVDTV-YFMNKAIKEGKRVLVEGANATMLDIDFGTYPY 246

Query: 240 VTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEF 299
           VTSSNT       G GI P ++  V+GVVKAYTTRVG GPFPTEL ++ GD+L++ G E+
Sbjct: 247 VTSSNTTVGGVCTGLGIPPNAIILVIGVVKAYTTRVGEGPFPTELFDENGDYLRKKGHEY 306

Query: 300 GTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRM--DGREVD 357
           GT T R RRCGWLD+ ++R   +ING   I LTKLDVL GL E+KICV Y+    G E+ 
Sbjct: 307 GTTTGRPRRCGWLDIPALRYVQMINGFDSINLTKLDVLSGLKEIKICVNYKNKGTGLEIG 366

Query: 358 FLPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIG 417
             P        +EPVY  + GWK   +  + F +LP  A+ Y+  IEE+L VP+  + +G
Sbjct: 367 RYPSSIEELEEYEPVYETMPGWKTDISKCKTFEELPENAQKYVLFIEELLGVPIVWIGVG 426

Query: 418 PERENTLI 425
           P REN ++
Sbjct: 427 PNRENMIV 434


>gnl|CDD|184325 PRK13786, PRK13786, adenylosuccinate synthetase; Provisional.
          Length = 424

 Score =  388 bits (999), Expect = e-108
 Identities = 184/424 (43%), Positives = 265/424 (62%), Gaps = 6/424 (1%)

Query: 5   VVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVVRPDK 64
           ++ G Q+GDEGKGKIVD L+++ D++ RFQGG+NAGHT+KV D VYKL L+PSG +  D 
Sbjct: 4   IITGAQFGDEGKGKIVDLLAKDYDIVARFQGGDNAGHTVKVGDEVYKLHLIPSGFLL-DA 62

Query: 65  MSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREGALSP 124
             +IG  VV++P     EI+ L   G+ V    L I    S+I+  H +LD LRE A + 
Sbjct: 63  RVLIGPGVVLNPEVLAEEIDMLEKHGVKVDAEKLGIDAKTSIIMPYHIELDGLRESART- 121

Query: 125 CGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFG--EKE 182
               IGTT+RGIG AY D++ R  +R+ DL D E + +++E+L        +  G     
Sbjct: 122 --EKIGTTKRGIGFAYIDKIARDEVRMSDLVDKERLMRRLEELAPQKEKEIKELGGDPSI 179

Query: 183 VLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPFVTS 242
           V  + ++++ +    ++ P++  +   + +   +G  +L EGAQG  LD  HGT  FVTS
Sbjct: 180 VRDEALIDKYLELGRQLAPYITDVSYEINKALDEGKSVLAEGAQGTHLDVIHGTQKFVTS 239

Query: 243 SNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEFGTV 302
           S+T++  A    G+ P  +  VLG+VKAY TRVG GP PTELK++ G+ L++VG EFGT 
Sbjct: 240 SSTIAGSACANLGVGPTRVDNVLGIVKAYITRVGEGPLPTELKDEAGEHLQDVGGEFGTT 299

Query: 303 TNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDFLPDD 362
           T R RRCGW DL  +++++ +NG   IALTKLDVL GLD +KICVGY +DG  +D+ P+ 
Sbjct: 300 TGRPRRCGWFDLPLLKKAIYLNGYTEIALTKLDVLTGLDPIKICVGYELDGEILDYPPEL 359

Query: 363 SIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGPEREN 422
           +    R  PVY  LEGW      ++ + DLP  ARNY+ ++EE++ VP+  +S+GP RE 
Sbjct: 360 TSDLARCVPVYEELEGWSTDLTEVKAYEDLPENARNYVERLEELMGVPIKYISVGPGREQ 419

Query: 423 TLIM 426
           T   
Sbjct: 420 TFKK 423


>gnl|CDD|184323 PRK13783, PRK13783, adenylosuccinate synthetase; Provisional.
          Length = 404

 Score =  349 bits (898), Expect = 7e-97
 Identities = 163/419 (38%), Positives = 238/419 (56%), Gaps = 21/419 (5%)

Query: 3   NVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVVRP 62
             V+VGLQWGDEGKGK+V +LS   D++VR+ GG NAGHT+   D      LLPS   + 
Sbjct: 2   KRVIVGLQWGDEGKGKVVTYLSRYYDIVVRYSGGANAGHTVNYGDFKVVHHLLPSADFKK 61

Query: 63  DKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREGAL 122
           +  + IG+ VV+D    + E+E L  +        + I+  A ++L +H++LD + E   
Sbjct: 62  NVGAAIGNGVVLDLEVLVEELEELKEKFPDY-SGRIFISELAHVVLPVHKELDEIIESVR 120

Query: 123 SPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFGEKE 182
                 IGTT+RGIGPAY D+V R  +R+ DL D E + + +E++L    +L +     E
Sbjct: 121 ---KNAIGTTKRGIGPAYADKVMRVGVRLADLFDEEKLREFLEKIL----SLYKKLYGIE 173

Query: 183 VLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPFVTS 242
              + ++E+L+   EKI     V+  +  +   +   +LFEG QG LLD D GTYP+VTS
Sbjct: 174 FDVEKMMEDLLTFYEKIKDL--VVSPVEIKRILEEKSVLFEGTQGVLLDLDVGTYPYVTS 231

Query: 243 SNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEFGTV 302
           SN  +   S G G  P  +  V+GV KAYTTRVG GPFPTEL  + G+ L++ G E+G  
Sbjct: 232 SNCSTTGVSAGMG-FPVKVDEVIGVFKAYTTRVGEGPFPTELFGEEGEKLRKAGHEYGAT 290

Query: 303 TNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDFLPDD 362
           T R RRCGWLDL  +R ++ ++GV  + +TK DVL+G +++K+CV Y + G+EV   P  
Sbjct: 291 TGRPRRCGWLDLPLLRYAIEVSGVDSLVMTKADVLNGFEKIKVCVRYEIGGKEVR-DPSS 349

Query: 363 SIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGPERE 421
                + EPVY   +GWK      + F         ++  IE      +A +S GP+ E
Sbjct: 350 LRDLEKAEPVYEEFDGWKSLED--KNFLK-------FVDFIERETGRKIAYISTGPKIE 399


>gnl|CDD|184326 PRK13788, PRK13788, adenylosuccinate synthetase; Provisional.
          Length = 404

 Score =  349 bits (896), Expect = 1e-96
 Identities = 178/427 (41%), Positives = 242/427 (56%), Gaps = 34/427 (7%)

Query: 1   MTNVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVV 60
           M  + ++G QWGDEGKGK+VD L+  AD +VR+QGG NAGHT+      +KL+LLPSGV+
Sbjct: 1   MPGIAIIGAQWGDEGKGKVVDALAPEADFVVRYQGGANAGHTVVAKGKTFKLNLLPSGVL 60

Query: 61  RPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREG 120
            P   S++G  +V+DP  F  E E+L   G+      L I+  A L+L  H+ +D     
Sbjct: 61  HPHATSVLGDGMVIDPFRFAEERENLRAGGL---NPKLLISERAHLVLPHHKYVDGR--- 114

Query: 121 ALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFGE 180
                   +GTT RGIGPAY DR  R  IR  DL D   + +++E+LL       R  G 
Sbjct: 115 -----KNFVGTTGRGIGPAYSDRARRVGIRFGDLLDEAVLRERVERLLEAKPNSTREAGW 169

Query: 181 KEVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPFV 240
             V  +  L +L   RE +LPF+    SLL    R+G  +LFEGAQ  LLD ++GTYP+V
Sbjct: 170 DTV--EKALADLAPMREILLPFIADTGSLLREAIREGKRVLFEGAQATLLDLNYGTYPYV 227

Query: 241 TSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVG---- 296
           TSS+       +G+G++  ++  V GV KA+TTRVG GPFPTE+  +    L+  G    
Sbjct: 228 TSSHPTVGGILVGAGVNHKAINKVYGVAKAFTTRVGHGPFPTEVFGEMAIRLRGKGGNPW 287

Query: 297 KEFGTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREV 356
            EFGT T R RR GWLDL  ++ +  +NG  G+ LTKLDVL GL+++K+CV Y  DG+  
Sbjct: 288 DEFGTTTGRARRVGWLDLVLLKYACEVNGFDGLVLTKLDVLSGLEKVKVCVEYDDDGQ-- 345

Query: 357 DFLPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSI 416
                         PVY  L GW     G++    LP +A+ Y+  IEE   VPV + S 
Sbjct: 346 --------------PVYKELPGWG-DLDGVKSREALPKEAQAYLELIEETTGVPVVMFST 390

Query: 417 GPERENT 423
            P RE+T
Sbjct: 391 SPRREDT 397


>gnl|CDD|184324 PRK13785, PRK13785, adenylosuccinate synthetase; Provisional.
          Length = 454

 Score =  346 bits (890), Expect = 6e-96
 Identities = 177/462 (38%), Positives = 256/462 (55%), Gaps = 40/462 (8%)

Query: 1   MTNVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVV 60
           MT V +VG Q GDEGKG +VD   + ADV+VR+QGG+NAGHT+      YKLSL+PSG V
Sbjct: 1   MT-VTIVGSQLGDEGKGGVVDLYGDAADVVVRYQGGDNAGHTVVHGGEEYKLSLVPSGAV 59

Query: 61  RPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREG 120
           R  K+ ++G+  VV+P     EI++L  +G+   P+ +R+A  A +IL  HR LD + E 
Sbjct: 60  R-GKIGVLGNGCVVNPETLFDEIDALRERGL--DPD-VRVAERAHVILPYHRVLDGIEEE 115

Query: 121 ALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFGE 180
           A S     +GTT RGIGP YED+ GRR +RV DL D + +  ++E ++    AL      
Sbjct: 116 AKSDSDLEVGTTGRGIGPTYEDKAGRRGVRVGDLLDPDVLRDRLEYVVPQKRALAEDVYG 175

Query: 181 KEV-----------LYKTILEELMYAREKILPFMDV-IWSLLERESRKGAHILFEGAQGF 228
            +            L++   E   Y        M V     L      G +++ EGAQG 
Sbjct: 176 LDASETPEAFDVDALFEEYRE---YGERLAEEDMTVNAGDFLAERIDDGDNVMLEGAQGT 232

Query: 229 LLDNDHGTYPFVTSSNTMSAQASIGSGISPGSL--GYVLGVVKAYTTRVGGGPFPTELKN 286
            +D DHG YP+VTSSN  +  A+ G+G+ P  +  G V+G+VKAY +RVG GP PTEL  
Sbjct: 233 SIDIDHGNYPYVTSSNPTAGGAATGTGLGPTVVGQGEVVGIVKAYLSRVGSGPLPTELGG 292

Query: 287 QTGD---------------FLKEVGKEFGTVTNRQRRCGWLDLASVRRSVIINGVKGIAL 331
             GD               +++E G E+GTVT R RR GWLD+  +R +   +G  G+A+
Sbjct: 293 VEGDTPDEGGRPDEEELATYIREEGGEYGTVTGRPRRVGWLDMPMLRHAARASGFTGLAI 352

Query: 332 TKLDVLDGLDELKICVGYRMDGREVDFLPDDSIYHTRFEPVYMILEGWKQ---STAGMRV 388
             +DVL GLDE+K+   Y +DG E+  +P  +    R EP +   +GW +   +      
Sbjct: 353 NHIDVLAGLDEVKVGHSYELDGEELLTMPATTERWARCEPNFRSFDGWPEVDWAAVAEEG 412

Query: 389 FADLPIQARNYIRKIEEVLEVPVALLSIGPERENTLIMSNPF 430
           +  LP  AR Y+  + + L+ P+  + +GP RE T+++ NPF
Sbjct: 413 YDALPENARTYLEYVSDELDTPIYAVGVGPGREETVVLENPF 454


>gnl|CDD|172324 PRK13787, PRK13787, adenylosuccinate synthetase; Provisional.
          Length = 423

 Score =  346 bits (889), Expect = 6e-96
 Identities = 178/427 (41%), Positives = 261/427 (61%), Gaps = 6/427 (1%)

Query: 1   MTNVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVV 60
           M   +VVG QWGDEGK K++D+LS++ D+IVR+QGG NAGHT+ V+   Y   L+PSGV+
Sbjct: 1   MPASLVVGTQWGDEGKAKVIDFLSKDTDIIVRYQGGANAGHTVVVHGKKYVFHLVPSGVI 60

Query: 61  RPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREG 120
               + +IG+ VV+DP  FI E + L  +G  V  + L +++   L+   H  +D  RE 
Sbjct: 61  YDQTICVIGNGVVLDPLFFIEECDRLQKEGFPVK-DKLLLSDACHLLFPYHSQIDSARET 119

Query: 121 ALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHN-ALRRSFG 179
             S     IGTT++GIG  Y D++ R  +RV DL D +   ++++ L+   N  L + +G
Sbjct: 120 TSSQ-EHKIGTTKKGIGICYADKMMRTGLRVGDLLD-KSYKRRLKHLVDEKNRELDKLYG 177

Query: 180 EKEVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPF 239
              V Y  I + L +   K+   +      L+ E +KG  +L EGAQG  LD D GTYP+
Sbjct: 178 MPPVSYNDINDGLKFFLSKVGKNIINTAYYLDTELKKGKRVLLEGAQGTGLDVDFGTYPY 237

Query: 240 VTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEF 299
           VTSSN  +  A IG+GIS   L +V+G+ KAYTTRVG GPFPTEL  + G+ L++ G EF
Sbjct: 238 VTSSNPTTGGALIGTGISFQHLKHVIGITKAYTTRVGEGPFPTELLGEAGEVLRQKGGEF 297

Query: 300 GTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDFL 359
           G  T R RRCGW D+  ++ SV ING+  IALTK+D+L   D + + VGY+++G+ +D  
Sbjct: 298 GATTGRPRRCGWFDVEMLKHSVRINGITSIALTKIDILSDYDTIPVAVGYKLNGKTLDCF 357

Query: 360 PDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGPE 419
           P   +   + EP+Y    GWK   +G+  F  LP + +NYI  +E+ + V + L+S GP+
Sbjct: 358 PSQGL--EKVEPLYEEFPGWKDDISGINEFQKLPEKCKNYISALEKWIGVKINLVSTGPD 415

Query: 420 RENTLIM 426
           R++T+I 
Sbjct: 416 RKDTIIG 422


>gnl|CDD|172322 PRK13784, PRK13784, adenylosuccinate synthetase; Provisional.
          Length = 428

 Score =  338 bits (869), Expect = 1e-93
 Identities = 177/442 (40%), Positives = 262/442 (59%), Gaps = 27/442 (6%)

Query: 1   MTNVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVV 60
           M+N+V+VG QWGDEGKGKI D L+E AD++VR+QGGNNAGHTL VN     L L+PSGV+
Sbjct: 1   MSNIVIVGAQWGDEGKGKIADTLAEKADLVVRYQGGNNAGHTLVVNGKKTFLHLIPSGVL 60

Query: 61  RPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREG 120
                 +IG  VV+DP A   EI  L  +GI ++  NL ++ + ++I S H+ LD +RE 
Sbjct: 61  HQHTKCVIGHGVVLDPVALDEEITRLQAKGIAISAENLFVSESCTIITSYHKLLDAVRES 120

Query: 121 ALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFGE 180
             S     IGTT +GIGPAYED+V R+ I+   L D + +  +          L  S  E
Sbjct: 121 NTS---EKIGTTGKGIGPAYEDKVSRKGIKFKHLFDKDLLRSR----------LAISLAE 167

Query: 181 KEVLYKTI-----------LEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFL 229
           KE L++ +            ++L    +K+  +    +S++++    G ++++EGAQG L
Sbjct: 168 KETLFRDLYKVEYPTLEQEFDKLFALGQKLKQYAADTFSIIDQAIAAGKNVVYEGAQGVL 227

Query: 230 LDNDHGTYPFVTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTG 289
           LD D+GTYPFVTSSNT  A    G+  +   L +V+G+ KAYTTRVG GPFPTEL +  G
Sbjct: 228 LDVDYGTYPFVTSSNTSVAGVYSGATTAGHGLDHVIGITKAYTTRVGEGPFPTELFDDVG 287

Query: 290 DFLKEVGKEFGTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGY 349
            F++  G E G  T R RRCGWLDL  ++ S   + +  IALTK+DVL  +D LK+C+GY
Sbjct: 288 KFIQHKGGEIGVTTGRIRRCGWLDLPLLKYSAKCSNLTSIALTKVDVLSDMDTLKVCIGY 347

Query: 350 RMDGREVDFLPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEV 409
           + +G+E+ +     I   + EP+ + +E +       +   ++P   + Y++ IE  + +
Sbjct: 348 KYEGKEI-YCAYPGIDLYKVEPILVEMEPFSIDETVTK--DNMPAALKTYLKTIENHVGI 404

Query: 410 PVALLSIGPERENTLIMSNPFE 431
           P++ L+ GP RE  L   + F+
Sbjct: 405 PISSLAYGPSREQILFFEDYFK 426


>gnl|CDD|179812 PRK04293, PRK04293, adenylosuccinate synthetase; Provisional.
          Length = 333

 Score =  234 bits (599), Expect = 4e-62
 Identities = 145/426 (34%), Positives = 198/426 (46%), Gaps = 98/426 (23%)

Query: 1   MTNVVVVGLQWGDEGKGKIVDWLS--ENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSG 58
           MT  +VVG  +GDEGKGKI+ +L+  +   +I R   G NAGHT++ N   Y L ++PSG
Sbjct: 1   MTCTIVVGGFFGDEGKGKIIAYLALKDKPSIIARGGVGPNAGHTVEYNGKKYGLRMIPSG 60

Query: 59  VVRPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLR 118
            V  D    IG+ V+VDP   + E+E L   G       + +     +I   H + D   
Sbjct: 61  FVNKDAKLAIGAGVLVDPEVLLKEVEELNVGG------RVFVDYRCGIIEEKHVEED-RS 113

Query: 119 EGALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSF 178
           +  LS     IG+T  G GPA  DRV RR            ++K +E+L           
Sbjct: 114 DEHLS---KKIGSTGTGCGPANADRVLRRL----------KLAKDVEEL----------- 149

Query: 179 GEKEVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYP 238
                             EK L   DV   + E   R G ++L EG QGF L   +GTYP
Sbjct: 150 ------------------EKYL--TDVPEEVNEALDR-GENVLIEGTQGFGLSLYYGTYP 188

Query: 239 FVTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKE 298
           +VTS +T ++  +   G+ P  +  V+ V K+Y TRVG GPFPTEL  +  + L  V  E
Sbjct: 189 YVTSKDTTASGIASDVGVGPTKVDEVIVVFKSYPTRVGEGPFPTELSLEEAEKLGLV--E 246

Query: 299 FGTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDF 358
           +GTVT R+RR G  D    RR+  ING   IA+TKLD LD     K              
Sbjct: 247 YGTVTGRRRRVGPFDFELARRAARINGATQIAITKLDKLD-----KEA------------ 289

Query: 359 LPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGP 418
                                     G+  +  LP +A+ +I +IEE L VPV L+S GP
Sbjct: 290 -------------------------YGVTEYDKLPPEAKKFIEEIEEELGVPVTLISTGP 324

Query: 419 ERENTL 424
           E E+T+
Sbjct: 325 ELEDTI 330


>gnl|CDD|173544 PTZ00351, PTZ00351, adenylosuccinate synthetase; Provisional.
          Length = 710

 Score = 73.9 bits (181), Expect = 8e-14
 Identities = 89/327 (27%), Positives = 144/327 (44%), Gaps = 56/327 (17%)

Query: 4   VVVVGLQWGDEGKGKIVDWLSEN--ADVIVRFQGGNNAGHTLKVNDIV---YKLSLLPSG 58
           ++V G  +GDEGKGK VD ++ +     I R   G NAGHT  V D     +  +L PSG
Sbjct: 172 IMVAGAFFGDEGKGKTVDAVAHHPLCTCIARVNSGENAGHT--VYDKAGRKFVFNLAPSG 229

Query: 59  VVRPDKMSIIGSSVVVDPHAFIS-EIESLAHQGICVTPNNLRIANNASLILSIHRDLDML 117
           ++ P K + IG   V+DP +F+  EI  L   GI     +     N  ++   H+ LD+L
Sbjct: 230 LLLPGKRNYIGPECVMDPVSFMEKEIIQLIDAGI--DYRDRLFIGNVCIVTPYHKLLDLL 287

Query: 118 REGALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDL-TDVEHISKKIEQLLLHHNALR- 175
              A S       +T +G+ P +  +V +R IR+  +  D E + K++E+ +  +  L  
Sbjct: 288 GSAANS-------STLKGMAPVHGSKVMKRGIRLDHIFNDDETLRKRLEKDMDTYLGLLK 340

Query: 176 -RSFGEKEVLYKTILEE--------------LMYAREKILPFM----------------- 203
            ++  + +V+ +   EE                 A++K+   +                 
Sbjct: 341 VKNLSDADVV-RLCREENSDGVVRVPDYVIAFAQAKDKVEFLVKLYRDRVRHNPDFPARC 399

Query: 204 DVIWSLLERESRKGAHILFEGAQGFLLDNDHGTY-PFVTSSNTMSAQASIGSGISPGSL- 261
           DV + L     R G  +L EG Q + L N    +    TS++T +A     S ++     
Sbjct: 400 DVTYELHAAVLR-GEKVLLEGPQSYWLSNARTKFWESTTSADTTAAGLLAASQLNFQKFK 458

Query: 262 GYVLGVVKAY-TTRVGGGPFPTELKNQ 287
             VL V KA  ++RVG G  P+    Q
Sbjct: 459 SVVLNVHKAPGSSRVGIGACPSSFVPQ 485


>gnl|CDD|178663 PLN03116, PLN03116, ferredoxin--NADP+ reductase; Provisional.
          Length = 307

 Score = 30.1 bits (68), Expect = 1.1
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 4/37 (10%)

Query: 193 MYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFL 229
           MY ++KI  + D I+ LL+     GAHI F G +G +
Sbjct: 239 MYVQDKIEEYSDEIFKLLD----NGAHIYFCGLKGMM 271


>gnl|CDD|184471 PRK14039, PRK14039, ADP-dependent glucokinase; Provisional.
          Length = 453

 Score = 30.2 bits (68), Expect = 1.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 357 DFLPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADL 392
           +  PD S Y  + E     L+ WK     +R+ A+L
Sbjct: 224 ETYPDGSTYREKLEDSLAQLKWWKSKNEKLRIHAEL 259


>gnl|CDD|162170 TIGR01041, ATP_syn_B_arch, ATP synthase archaeal, B subunit.
           Archaeal ATP synthase shares extensive sequence
           similarity with eukaryotic and prokaryotic V-type
           (H+)-ATPases.
          Length = 458

 Score = 28.9 bits (65), Expect = 2.7
 Identities = 16/31 (51%), Positives = 18/31 (58%)

Query: 395 QARNYIRKIEEVLEVPVALLSIGPERENTLI 425
           Q RN  R IEE L++   LLSI PE E   I
Sbjct: 412 QGRNENRSIEETLDIGWELLSILPESELKRI 442


>gnl|CDD|179494 PRK02898, PRK02898, cobalt transport protein CbiN; Provisional.
          Length = 100

 Score = 28.4 bits (64), Expect = 3.9
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 4/24 (16%)

Query: 247 SAQASIGSGISPGSLGYVLGVVKA 270
           + QA++G+GI    +GY+LG  K 
Sbjct: 72  ALQAALGAGI----IGYILGYYKG 91


>gnl|CDD|171521 PRK12467, PRK12467, peptide synthase; Provisional.
          Length = 3956

 Score = 28.2 bits (63), Expect = 3.9
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 156  DVEHISKKIEQLLLHHNALRRSFGEKE 182
            D E +   ++ LL+HH+ALR  F +++
Sbjct: 2214 DAELLEAALQALLVHHDALRLGFVQED 2240


>gnl|CDD|182993 PRK11144, modC, molybdate transporter ATP-binding protein;
           Provisional.
          Length = 352

 Score = 28.3 bits (64), Expect = 4.4
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 14/53 (26%)

Query: 51  KLSL--LPSGVVRPDKMSI-IGSSVVVDPHAFISEIESLAHQGICVTPNNLRI 100
           K SL    SG+ RP K  I +   V+ D           A +GIC+ P   RI
Sbjct: 37  KTSLINAISGLTRPQKGRIVLNGRVLFD-----------AEKGICLPPEKRRI 78


>gnl|CDD|147951 pfam06072, Herpes_US9, Alphaherpesvirus tegument protein US9.  This
           family consists of several US9 and related proteins from
           the Alphaherpesviruses. The function of the US9 protein
           is unknown although in Bovine herpesvirus 5 Us9 is
           essential for the anterograde spread of the virus from
           the olfactory mucosa to the bulb.
          Length = 60

 Score = 27.8 bits (62), Expect = 5.6
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)

Query: 282 TELKNQT-GDFLKEVGKEFGTVTNRQRRCG 310
           +E  N+T  +FL+ VG+    +  R+RRCG
Sbjct: 4   SESDNETATEFLRRVGRRQHAIRRRRRRCG 33


>gnl|CDD|128818 smart00545, JmjN, Small domain found in the jumonji family of
          transcription factors.  To date, this domain always
          co-occurs with the JmjC domain (although the reverse is
          not true).
          Length = 42

 Score = 27.6 bits (62), Expect = 6.1
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 9/42 (21%)

Query: 59 VVRPDKMSIIGSSVVVDPHAFISEIESLAHQ-GIC--VTPNN 97
          V  P            DP A+IS+I   A + GIC  V P +
Sbjct: 4  VFYPTMEEF------KDPLAYISKIRPQAEKYGICKVVPPKS 39


>gnl|CDD|105695 PRK12491, PRK12491, pyrroline-5-carboxylate reductase; Reviewed.
          Length = 272

 Score = 27.3 bits (60), Expect = 7.0
 Identities = 55/203 (27%), Positives = 82/203 (40%), Gaps = 58/203 (28%)

Query: 90  GICVTPNNLRIANNAS-LILSIHRDL---------DMLREGALS---PCGAHIGTTQRGI 136
           GI +T NN  +AN+A  LILSI  DL         D ++   +      G  I +T    
Sbjct: 50  GITITTNNNEVANSADILILSIKPDLYSSVINQIKDQIKNDVIVVTIAAGKSIKST---- 105

Query: 137 GPAYEDRVGR--RAIRVMDLTDV------------EHISKK-IEQLLLHHNALRRSFGEK 181
               E+   R  + IRVM  T V            E +++K I+++L   N     FG+ 
Sbjct: 106 ----ENEFDRKLKVIRVMPNTPVLVGEGMSALCFNEMVTEKDIKEVLNIFN----IFGQT 157

Query: 182 EVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEG-AQGFLLDN--DHGTYP 238
           EV+            EK+   MDV+ S +   S    ++  E  A   +L        Y 
Sbjct: 158 EVV-----------NEKL---MDVVTS-ISGSSPAYVYMFIEAMADAAVLGGMPRKQAYK 202

Query: 239 FVTSSNTMSAQASIGSGISPGSL 261
           F   +   SA+  + +GI PG L
Sbjct: 203 FAAQAVLGSAKMVLETGIHPGEL 225


>gnl|CDD|183432 PRK12316, PRK12316, peptide synthase; Provisional.
          Length = 5163

 Score = 27.2 bits (60), Expect = 8.1
 Identities = 17/83 (20%), Positives = 34/83 (40%)

Query: 148  AIRVMDLTDVEHISKKIEQLLLHHNALRRSFGEKEVLYKTILEELMYAREKILPFMDVIW 207
            A+ +  + D   + +  + L+L H  LR  F E     + ++   M  R  +     V  
Sbjct: 2630 ALHLRGVLDQAALEQAFDALVLRHETLRTRFVEVGEQTRQVILPNMSLRIVLEDCAGVAD 2689

Query: 208  SLLERESRKGAHILFEGAQGFLL 230
            + + +   +     F+ A+G LL
Sbjct: 2690 AAIRQRVAEEIQRPFDLARGPLL 2712


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.320    0.139    0.408 

Gapped
Lambda     K      H
   0.267   0.0663    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 7,295,848
Number of extensions: 491001
Number of successful extensions: 1004
Number of sequences better than 10.0: 1
Number of HSP's gapped: 958
Number of HSP's successfully gapped: 31
Length of query: 432
Length of database: 5,994,473
Length adjustment: 96
Effective length of query: 336
Effective length of database: 3,920,105
Effective search space: 1317155280
Effective search space used: 1317155280
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (26.6 bits)