RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254780613|ref|YP_003065026.1| adenylosuccinate synthetase [Candidatus Liberibacter asiaticus str. psy62] (432 letters) >gnl|CDD|179227 PRK01117, PRK01117, adenylosuccinate synthetase; Provisional. Length = 430 Score = 698 bits (1804), Expect = 0.0 Identities = 233/434 (53%), Positives = 303/434 (69%), Gaps = 6/434 (1%) Query: 1 MTNVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVV 60 M NVVVVG QWGDEGKGKIVD LSE ADV+VRFQGG+NAGHTL ++ YKL L+PSG++ Sbjct: 1 MKNVVVVGTQWGDEGKGKIVDLLSERADVVVRFQGGHNAGHTLVIDGKKYKLHLIPSGIL 60 Query: 61 RPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREG 120 RP K +IG+ VV+DP A + EI+ L +G+ V LRI+ A LIL HR LD RE Sbjct: 61 RPGKTCVIGNGVVLDPEALLKEIDELEARGVDV-RERLRISERAHLILPYHRALDKAREK 119 Query: 121 ALSPCGAH-IGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNA-LRRSF 178 A G IGTT RGIGPAYED+V RR IRV DL D E ++K+E+ L + N L + + Sbjct: 120 AR---GKKKIGTTGRGIGPAYEDKVARRGIRVGDLLDPETFAEKLEENLEYKNFLLTKYY 176 Query: 179 GEKEVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYP 238 G + V ++ IL+E + E++ P++ LL + G +LFEGAQG LLD DHGTYP Sbjct: 177 GAEAVDFEEILDEYLEYAERLKPYVTDTSLLLNDALKAGKRVLFEGAQGTLLDIDHGTYP 236 Query: 239 FVTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKE 298 FVTSSNT + A+ GSG+ P + YVLG+ KAYTTRVG GPFPTEL ++ G+ L+E G E Sbjct: 237 FVTSSNTTAGGAATGSGVGPTKIDYVLGIAKAYTTRVGSGPFPTELFDEVGEHLRERGHE 296 Query: 299 FGTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDF 358 FGT T R RRCGW D ++R +V +NG+ G+ALTKLDVLDGL+E+KICV Y +DG+ +D+ Sbjct: 297 FGTTTGRPRRCGWFDAVALRYAVRVNGLTGLALTKLDVLDGLEEIKICVAYELDGKRIDY 356 Query: 359 LPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGP 418 P R EP+Y L GW +ST G+R F DLP AR YI++IEE+ VP++++S GP Sbjct: 357 FPASLEDLARCEPIYEELPGWSESTTGVRSFDDLPENARKYIKRIEELTGVPISIISTGP 416 Query: 419 ERENTLIMSNPFED 432 +R+ T+I+ +PF Sbjct: 417 DRDQTIILRDPFAA 430 >gnl|CDD|129024 smart00788, Adenylsucc_synt, Adenylosuccinate synthetase. Adenylosuccinate synthetase plays an important role in purine biosynthesis, by catalyzing the GTP-dependent conversion of IMP and aspartic acid to AMP. Adenylosuccinate synthetase has been characterized from various sources ranging from Escherichia coli (gene purA) to vertebrate tissues. In vertebrates, two isozymes are present - one involved in purine biosynthesis and the other in the purine nucleotide cycle. The crystal structure of adenylosuccinate synthetase from E. coli reveals that the dominant structural element of each monomer of the homodimer is a central beta-sheet of 10 strands. The first nine strands of the sheet are mutually parallel with right-handed crossover connections between the strands. The 10th strand is antiparallel with respect to the first nine strands. In addition, the enzyme has two antiparallel beta-sheets, comprised of two strands and three strands each, 11 alpha-helices and two short 3/10-helices. Further, it has been suggested that the similarities in the GTP-binding domains of the synthetase and the p21ras protein are an example of convergent evolution of two distinct families of GTP-binding proteins PUBMED:8244965. Structures of adenylosuccinate synthetase from Triticum aestivum and Arabidopsis thaliana when compared with the known structures from E. coli reveals that the overall fold is very similar to that of the E. coli protein PUBMED:10669609. Length = 421 Score = 625 bits (1614), Expect = e-180 Identities = 233/424 (54%), Positives = 300/424 (70%), Gaps = 4/424 (0%) Query: 3 NVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVVRP 62 VVVVG QWGDEGKGKIVD+L+E ADV+VRFQGGNNAGHT+ V YKL LLPSG++ P Sbjct: 1 VVVVVGAQWGDEGKGKIVDYLAEKADVVVRFQGGNNAGHTVVVGGKKYKLHLLPSGILNP 60 Query: 63 DKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREGAL 122 +K +IG+ VV+DP A EI+ L +G+ V + L I++ A LIL H LD LRE A Sbjct: 61 NKKCVIGNGVVIDPEALFKEIDQLEAKGVDVR-DRLFISDRAHLILPYHIALDKLREKAR 119 Query: 123 SPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSF-GEK 181 IGTT RGIGPAYED+V RR IRV DL D + +K+E+LL + N L + G + Sbjct: 120 G--KKKIGTTGRGIGPAYEDKVARRGIRVGDLFDEDVFREKLEELLDYKNFLLKKLYGAE 177 Query: 182 EVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPFVT 241 V + ILEEL+ E++ P++ + LL + G +LFEGAQG LLD DHGTYP+VT Sbjct: 178 PVDVEEILEELLEYAERLKPYVVDVSELLNDALKAGKKVLFEGAQGTLLDIDHGTYPYVT 237 Query: 242 SSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEFGT 301 SSNT + A+ G+GI P + YV+GVVKAYTTRVG GPFPTEL ++TG+ L+E G EFGT Sbjct: 238 SSNTTAGGAATGAGIGPTRIDYVIGVVKAYTTRVGEGPFPTELFDETGEKLRERGHEFGT 297 Query: 302 VTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDFLPD 361 T R RRCGW D +R +V ING+ G+ALTKLDVLDGLDE+K+CV Y++DG+E+D+ P Sbjct: 298 TTGRPRRCGWFDAVLLRYAVRINGITGLALTKLDVLDGLDEIKVCVAYKLDGKEIDYFPA 357 Query: 362 DSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGPERE 421 D R EP+Y L GWK+ T G+R + DLP A+ YI +IEE++ VPV+L+S GP+RE Sbjct: 358 DLEDLERCEPIYETLPGWKEDTTGVRSYEDLPENAKKYIERIEELVGVPVSLISTGPDRE 417 Query: 422 NTLI 425 T++ Sbjct: 418 QTIV 421 >gnl|CDD|161751 TIGR00184, purA, adenylosuccinate synthase. Alternate name IMP--aspartate ligase. Length = 425 Score = 477 bits (1230), Expect = e-135 Identities = 198/427 (46%), Positives = 271/427 (63%), Gaps = 4/427 (0%) Query: 5 VVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVVRPDK 64 VVVG QWGDEGKGKIVD L++ D++ R+QGG+NAGHT+ ++ + Y L L+PSG + PD Sbjct: 1 VVVGGQWGDEGKGKIVDLLADKPDIVARYQGGHNAGHTIVIDGVKYGLHLIPSGFLYPDA 60 Query: 65 MSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREGALSP 124 +IG+ VVVDP + E+E L +GI V + L ++ LIL H+ LD RE + Sbjct: 61 KLLIGNGVVVDPEVLLKEMEYLEKRGISVR-DRLFVSYRCHLILPYHKKLDKAREKSKL- 118 Query: 125 CGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRS-FGEKEV 183 IGTT +GIGPAYED+V R +RV DL D E ++K + +L + N + ++ V Sbjct: 119 -AKKIGTTGKGIGPAYEDKVARSGLRVGDLLDDEAFAEKAKNILEYLNEQLVKYYKDEGV 177 Query: 184 LYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPFVTSS 243 Y+ L+E M E++ PF+ + L +G +LFEGAQG +LD D+GTYP+VTSS Sbjct: 178 DYEKKLDEYMKYAEELKPFVVDVSVELNEALDEGEKVLFEGAQGTMLDIDYGTYPYVTSS 237 Query: 244 NTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEFGTVT 303 NT + + G GI P + V+GV KAYTTRVG GPFPTEL ++ G+ L G EFGT T Sbjct: 238 NTTAGGVATGVGIGPTKVDEVIGVFKAYTTRVGAGPFPTELSDEEGEKLGTKGAEFGTTT 297 Query: 304 NRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDFLPDDS 363 R+RRCGW DL + R + +NG +ALTKLDVLDG+DE+K+CV YRM G ++ P D Sbjct: 298 GRRRRCGWFDLVAARYACRLNGATQLALTKLDVLDGIDEIKVCVAYRMKGEILELFPLDL 357 Query: 364 IYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGPERENT 423 EP+Y L GW + G+ ++DLP A+ YI +IEE+ VPV ++S GPERE T Sbjct: 358 KDLKGVEPIYETLPGWDKECTGVTEYSDLPENAKKYIERIEELTGVPVTIISTGPEREQT 417 Query: 424 LIMSNPF 430 + + Sbjct: 418 IDLRKEL 424 >gnl|CDD|178129 PLN02513, PLN02513, adenylosuccinate synthase. Length = 427 Score = 442 bits (1138), Expect = e-124 Identities = 183/427 (42%), Positives = 258/427 (60%), Gaps = 9/427 (2%) Query: 3 NVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDI--VYKLSLLPSGVV 60 V+G QWGDEGKGK+VD L+++ D++ R QGG NAGHT+ ND + L L+PSG++ Sbjct: 4 VSAVLGTQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTI-YNDEGKKFALHLVPSGIL 62 Query: 61 RPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREG 120 +IG+ VVV EI+ L G+ L +++ A L+ H+++D LRE Sbjct: 63 NEKTTCVIGNGVVVHLPGLFEEIDGLESNGVSCE-GRLLVSDRAHLLFDFHQEVDGLREA 121 Query: 121 ALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFGE 180 L+ G+ IGTT+RGIGPAY + R +RV DL ++ ++K+ +LL A F Sbjct: 122 ELA--GSKIGTTKRGIGPAYSSKATRNGLRVGDLRHMDTFAEKLRELLADAAARFEGFEY 179 Query: 181 KEVLYKTILEELMYAREKILPFM-DVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPF 239 + + +E E++ PF+ D + L + G IL EGAQ +LD D GTYPF Sbjct: 180 DASMVEEEVEAYKKFAERLEPFITDTV-HYLNEAIQAGKKILVEGAQATMLDIDFGTYPF 238 Query: 240 VTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEF 299 VTSSN + G GI+P LG ++GVVKAYTTRVG GPFPTEL + GD L+E G+EF Sbjct: 239 VTSSNPSAGGICTGLGIAPRKLGDIIGVVKAYTTRVGSGPFPTELFGELGDLLREAGQEF 298 Query: 300 GTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRM-DGREVDF 358 GT T R RRCGWLD+ +++ S ING + LTKLDVL GL E+KI V Y+ DG+ V Sbjct: 299 GTTTGRPRRCGWLDIVALKYSCQINGFTSLNLTKLDVLSGLPEIKIGVAYKTPDGKVVKS 358 Query: 359 LPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGP 418 P D + E VY +L GW++ + +R + DLP A+ Y+ +IEE++ VPV + +GP Sbjct: 359 FPADLDTLEQVEVVYEVLPGWQEDISSVRNYDDLPAAAQAYVERIEELVGVPVHYIGVGP 418 Query: 419 ERENTLI 425 R+ ++ Sbjct: 419 GRDALIV 425 >gnl|CDD|185572 PTZ00350, PTZ00350, adenylosuccinate synthetase; Provisional. Length = 436 Score = 434 bits (1118), Expect = e-122 Identities = 182/428 (42%), Positives = 256/428 (59%), Gaps = 14/428 (3%) Query: 4 VVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVVRPD 63 VV++G QWGDEGKGK+VD LSE AD++ RF GG NAGHT+ V+ Y L LLP G++ P+ Sbjct: 15 VVILGAQWGDEGKGKLVDILSEKADIVARFNGGANAGHTIVVDGKKYALHLLPCGILYPN 74 Query: 64 KMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREGALS 123 ++++G+ VV+ + + EIE L +GI + L I++ A L+ +H+ +D ++E Sbjct: 75 CINVLGNGVVIHLPSLLEEIEQLTKKGINLL-GRLYISDRAHLVFDLHQAIDGIQESEKG 133 Query: 124 PCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFG---E 180 G IGTT+RGIGP Y + R +RV DL + E KK +L+ E Sbjct: 134 KGGTQIGTTKRGIGPCYSTKASRTGLRVGDLLNFETFEKKYRKLVEKLQEQYNIEEYDAE 193 Query: 181 KEVLYKTILEELMYAREKILPFM-DVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPF 239 +E LE EK+ + D + + + ++G +L EGA +LD D GTYP+ Sbjct: 194 EE------LERYKGYAEKLKDMIVDTV-YFMNKAIKEGKRVLVEGANATMLDIDFGTYPY 246 Query: 240 VTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEF 299 VTSSNT G GI P ++ V+GVVKAYTTRVG GPFPTEL ++ GD+L++ G E+ Sbjct: 247 VTSSNTTVGGVCTGLGIPPNAIILVIGVVKAYTTRVGEGPFPTELFDENGDYLRKKGHEY 306 Query: 300 GTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRM--DGREVD 357 GT T R RRCGWLD+ ++R +ING I LTKLDVL GL E+KICV Y+ G E+ Sbjct: 307 GTTTGRPRRCGWLDIPALRYVQMINGFDSINLTKLDVLSGLKEIKICVNYKNKGTGLEIG 366 Query: 358 FLPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIG 417 P +EPVY + GWK + + F +LP A+ Y+ IEE+L VP+ + +G Sbjct: 367 RYPSSIEELEEYEPVYETMPGWKTDISKCKTFEELPENAQKYVLFIEELLGVPIVWIGVG 426 Query: 418 PERENTLI 425 P REN ++ Sbjct: 427 PNRENMIV 434 >gnl|CDD|184325 PRK13786, PRK13786, adenylosuccinate synthetase; Provisional. Length = 424 Score = 388 bits (999), Expect = e-108 Identities = 184/424 (43%), Positives = 265/424 (62%), Gaps = 6/424 (1%) Query: 5 VVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVVRPDK 64 ++ G Q+GDEGKGKIVD L+++ D++ RFQGG+NAGHT+KV D VYKL L+PSG + D Sbjct: 4 IITGAQFGDEGKGKIVDLLAKDYDIVARFQGGDNAGHTVKVGDEVYKLHLIPSGFLL-DA 62 Query: 65 MSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREGALSP 124 +IG VV++P EI+ L G+ V L I S+I+ H +LD LRE A + Sbjct: 63 RVLIGPGVVLNPEVLAEEIDMLEKHGVKVDAEKLGIDAKTSIIMPYHIELDGLRESART- 121 Query: 125 CGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFG--EKE 182 IGTT+RGIG AY D++ R +R+ DL D E + +++E+L + G Sbjct: 122 --EKIGTTKRGIGFAYIDKIARDEVRMSDLVDKERLMRRLEELAPQKEKEIKELGGDPSI 179 Query: 183 VLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPFVTS 242 V + ++++ + ++ P++ + + + +G +L EGAQG LD HGT FVTS Sbjct: 180 VRDEALIDKYLELGRQLAPYITDVSYEINKALDEGKSVLAEGAQGTHLDVIHGTQKFVTS 239 Query: 243 SNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEFGTV 302 S+T++ A G+ P + VLG+VKAY TRVG GP PTELK++ G+ L++VG EFGT Sbjct: 240 SSTIAGSACANLGVGPTRVDNVLGIVKAYITRVGEGPLPTELKDEAGEHLQDVGGEFGTT 299 Query: 303 TNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDFLPDD 362 T R RRCGW DL +++++ +NG IALTKLDVL GLD +KICVGY +DG +D+ P+ Sbjct: 300 TGRPRRCGWFDLPLLKKAIYLNGYTEIALTKLDVLTGLDPIKICVGYELDGEILDYPPEL 359 Query: 363 SIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGPEREN 422 + R PVY LEGW ++ + DLP ARNY+ ++EE++ VP+ +S+GP RE Sbjct: 360 TSDLARCVPVYEELEGWSTDLTEVKAYEDLPENARNYVERLEELMGVPIKYISVGPGREQ 419 Query: 423 TLIM 426 T Sbjct: 420 TFKK 423 >gnl|CDD|184323 PRK13783, PRK13783, adenylosuccinate synthetase; Provisional. Length = 404 Score = 349 bits (898), Expect = 7e-97 Identities = 163/419 (38%), Positives = 238/419 (56%), Gaps = 21/419 (5%) Query: 3 NVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVVRP 62 V+VGLQWGDEGKGK+V +LS D++VR+ GG NAGHT+ D LLPS + Sbjct: 2 KRVIVGLQWGDEGKGKVVTYLSRYYDIVVRYSGGANAGHTVNYGDFKVVHHLLPSADFKK 61 Query: 63 DKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREGAL 122 + + IG+ VV+D + E+E L + + I+ A ++L +H++LD + E Sbjct: 62 NVGAAIGNGVVLDLEVLVEELEELKEKFPDY-SGRIFISELAHVVLPVHKELDEIIESVR 120 Query: 123 SPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFGEKE 182 IGTT+RGIGPAY D+V R +R+ DL D E + + +E++L +L + E Sbjct: 121 ---KNAIGTTKRGIGPAYADKVMRVGVRLADLFDEEKLREFLEKIL----SLYKKLYGIE 173 Query: 183 VLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPFVTS 242 + ++E+L+ EKI V+ + + + +LFEG QG LLD D GTYP+VTS Sbjct: 174 FDVEKMMEDLLTFYEKIKDL--VVSPVEIKRILEEKSVLFEGTQGVLLDLDVGTYPYVTS 231 Query: 243 SNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEFGTV 302 SN + S G G P + V+GV KAYTTRVG GPFPTEL + G+ L++ G E+G Sbjct: 232 SNCSTTGVSAGMG-FPVKVDEVIGVFKAYTTRVGEGPFPTELFGEEGEKLRKAGHEYGAT 290 Query: 303 TNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDFLPDD 362 T R RRCGWLDL +R ++ ++GV + +TK DVL+G +++K+CV Y + G+EV P Sbjct: 291 TGRPRRCGWLDLPLLRYAIEVSGVDSLVMTKADVLNGFEKIKVCVRYEIGGKEVR-DPSS 349 Query: 363 SIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGPERE 421 + EPVY +GWK + F ++ IE +A +S GP+ E Sbjct: 350 LRDLEKAEPVYEEFDGWKSLED--KNFLK-------FVDFIERETGRKIAYISTGPKIE 399 >gnl|CDD|184326 PRK13788, PRK13788, adenylosuccinate synthetase; Provisional. Length = 404 Score = 349 bits (896), Expect = 1e-96 Identities = 178/427 (41%), Positives = 242/427 (56%), Gaps = 34/427 (7%) Query: 1 MTNVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVV 60 M + ++G QWGDEGKGK+VD L+ AD +VR+QGG NAGHT+ +KL+LLPSGV+ Sbjct: 1 MPGIAIIGAQWGDEGKGKVVDALAPEADFVVRYQGGANAGHTVVAKGKTFKLNLLPSGVL 60 Query: 61 RPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREG 120 P S++G +V+DP F E E+L G+ L I+ A L+L H+ +D Sbjct: 61 HPHATSVLGDGMVIDPFRFAEERENLRAGGL---NPKLLISERAHLVLPHHKYVDGR--- 114 Query: 121 ALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFGE 180 +GTT RGIGPAY DR R IR DL D + +++E+LL R G Sbjct: 115 -----KNFVGTTGRGIGPAYSDRARRVGIRFGDLLDEAVLRERVERLLEAKPNSTREAGW 169 Query: 181 KEVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPFV 240 V + L +L RE +LPF+ SLL R+G +LFEGAQ LLD ++GTYP+V Sbjct: 170 DTV--EKALADLAPMREILLPFIADTGSLLREAIREGKRVLFEGAQATLLDLNYGTYPYV 227 Query: 241 TSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVG---- 296 TSS+ +G+G++ ++ V GV KA+TTRVG GPFPTE+ + L+ G Sbjct: 228 TSSHPTVGGILVGAGVNHKAINKVYGVAKAFTTRVGHGPFPTEVFGEMAIRLRGKGGNPW 287 Query: 297 KEFGTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREV 356 EFGT T R RR GWLDL ++ + +NG G+ LTKLDVL GL+++K+CV Y DG+ Sbjct: 288 DEFGTTTGRARRVGWLDLVLLKYACEVNGFDGLVLTKLDVLSGLEKVKVCVEYDDDGQ-- 345 Query: 357 DFLPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSI 416 PVY L GW G++ LP +A+ Y+ IEE VPV + S Sbjct: 346 --------------PVYKELPGWG-DLDGVKSREALPKEAQAYLELIEETTGVPVVMFST 390 Query: 417 GPERENT 423 P RE+T Sbjct: 391 SPRREDT 397 >gnl|CDD|184324 PRK13785, PRK13785, adenylosuccinate synthetase; Provisional. Length = 454 Score = 346 bits (890), Expect = 6e-96 Identities = 177/462 (38%), Positives = 256/462 (55%), Gaps = 40/462 (8%) Query: 1 MTNVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVV 60 MT V +VG Q GDEGKG +VD + ADV+VR+QGG+NAGHT+ YKLSL+PSG V Sbjct: 1 MT-VTIVGSQLGDEGKGGVVDLYGDAADVVVRYQGGDNAGHTVVHGGEEYKLSLVPSGAV 59 Query: 61 RPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREG 120 R K+ ++G+ VV+P EI++L +G+ P+ +R+A A +IL HR LD + E Sbjct: 60 R-GKIGVLGNGCVVNPETLFDEIDALRERGL--DPD-VRVAERAHVILPYHRVLDGIEEE 115 Query: 121 ALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFGE 180 A S +GTT RGIGP YED+ GRR +RV DL D + + ++E ++ AL Sbjct: 116 AKSDSDLEVGTTGRGIGPTYEDKAGRRGVRVGDLLDPDVLRDRLEYVVPQKRALAEDVYG 175 Query: 181 KEV-----------LYKTILEELMYAREKILPFMDV-IWSLLERESRKGAHILFEGAQGF 228 + L++ E Y M V L G +++ EGAQG Sbjct: 176 LDASETPEAFDVDALFEEYRE---YGERLAEEDMTVNAGDFLAERIDDGDNVMLEGAQGT 232 Query: 229 LLDNDHGTYPFVTSSNTMSAQASIGSGISPGSL--GYVLGVVKAYTTRVGGGPFPTELKN 286 +D DHG YP+VTSSN + A+ G+G+ P + G V+G+VKAY +RVG GP PTEL Sbjct: 233 SIDIDHGNYPYVTSSNPTAGGAATGTGLGPTVVGQGEVVGIVKAYLSRVGSGPLPTELGG 292 Query: 287 QTGD---------------FLKEVGKEFGTVTNRQRRCGWLDLASVRRSVIINGVKGIAL 331 GD +++E G E+GTVT R RR GWLD+ +R + +G G+A+ Sbjct: 293 VEGDTPDEGGRPDEEELATYIREEGGEYGTVTGRPRRVGWLDMPMLRHAARASGFTGLAI 352 Query: 332 TKLDVLDGLDELKICVGYRMDGREVDFLPDDSIYHTRFEPVYMILEGWKQ---STAGMRV 388 +DVL GLDE+K+ Y +DG E+ +P + R EP + +GW + + Sbjct: 353 NHIDVLAGLDEVKVGHSYELDGEELLTMPATTERWARCEPNFRSFDGWPEVDWAAVAEEG 412 Query: 389 FADLPIQARNYIRKIEEVLEVPVALLSIGPERENTLIMSNPF 430 + LP AR Y+ + + L+ P+ + +GP RE T+++ NPF Sbjct: 413 YDALPENARTYLEYVSDELDTPIYAVGVGPGREETVVLENPF 454 >gnl|CDD|172324 PRK13787, PRK13787, adenylosuccinate synthetase; Provisional. Length = 423 Score = 346 bits (889), Expect = 6e-96 Identities = 178/427 (41%), Positives = 261/427 (61%), Gaps = 6/427 (1%) Query: 1 MTNVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVV 60 M +VVG QWGDEGK K++D+LS++ D+IVR+QGG NAGHT+ V+ Y L+PSGV+ Sbjct: 1 MPASLVVGTQWGDEGKAKVIDFLSKDTDIIVRYQGGANAGHTVVVHGKKYVFHLVPSGVI 60 Query: 61 RPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREG 120 + +IG+ VV+DP FI E + L +G V + L +++ L+ H +D RE Sbjct: 61 YDQTICVIGNGVVLDPLFFIEECDRLQKEGFPVK-DKLLLSDACHLLFPYHSQIDSARET 119 Query: 121 ALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHN-ALRRSFG 179 S IGTT++GIG Y D++ R +RV DL D + ++++ L+ N L + +G Sbjct: 120 TSSQ-EHKIGTTKKGIGICYADKMMRTGLRVGDLLD-KSYKRRLKHLVDEKNRELDKLYG 177 Query: 180 EKEVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPF 239 V Y I + L + K+ + L+ E +KG +L EGAQG LD D GTYP+ Sbjct: 178 MPPVSYNDINDGLKFFLSKVGKNIINTAYYLDTELKKGKRVLLEGAQGTGLDVDFGTYPY 237 Query: 240 VTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEF 299 VTSSN + A IG+GIS L +V+G+ KAYTTRVG GPFPTEL + G+ L++ G EF Sbjct: 238 VTSSNPTTGGALIGTGISFQHLKHVIGITKAYTTRVGEGPFPTELLGEAGEVLRQKGGEF 297 Query: 300 GTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDFL 359 G T R RRCGW D+ ++ SV ING+ IALTK+D+L D + + VGY+++G+ +D Sbjct: 298 GATTGRPRRCGWFDVEMLKHSVRINGITSIALTKIDILSDYDTIPVAVGYKLNGKTLDCF 357 Query: 360 PDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGPE 419 P + + EP+Y GWK +G+ F LP + +NYI +E+ + V + L+S GP+ Sbjct: 358 PSQGL--EKVEPLYEEFPGWKDDISGINEFQKLPEKCKNYISALEKWIGVKINLVSTGPD 415 Query: 420 RENTLIM 426 R++T+I Sbjct: 416 RKDTIIG 422 >gnl|CDD|172322 PRK13784, PRK13784, adenylosuccinate synthetase; Provisional. Length = 428 Score = 338 bits (869), Expect = 1e-93 Identities = 177/442 (40%), Positives = 262/442 (59%), Gaps = 27/442 (6%) Query: 1 MTNVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVV 60 M+N+V+VG QWGDEGKGKI D L+E AD++VR+QGGNNAGHTL VN L L+PSGV+ Sbjct: 1 MSNIVIVGAQWGDEGKGKIADTLAEKADLVVRYQGGNNAGHTLVVNGKKTFLHLIPSGVL 60 Query: 61 RPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREG 120 +IG VV+DP A EI L +GI ++ NL ++ + ++I S H+ LD +RE Sbjct: 61 HQHTKCVIGHGVVLDPVALDEEITRLQAKGIAISAENLFVSESCTIITSYHKLLDAVRES 120 Query: 121 ALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFGE 180 S IGTT +GIGPAYED+V R+ I+ L D + + + L S E Sbjct: 121 NTS---EKIGTTGKGIGPAYEDKVSRKGIKFKHLFDKDLLRSR----------LAISLAE 167 Query: 181 KEVLYKTI-----------LEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFL 229 KE L++ + ++L +K+ + +S++++ G ++++EGAQG L Sbjct: 168 KETLFRDLYKVEYPTLEQEFDKLFALGQKLKQYAADTFSIIDQAIAAGKNVVYEGAQGVL 227 Query: 230 LDNDHGTYPFVTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTG 289 LD D+GTYPFVTSSNT A G+ + L +V+G+ KAYTTRVG GPFPTEL + G Sbjct: 228 LDVDYGTYPFVTSSNTSVAGVYSGATTAGHGLDHVIGITKAYTTRVGEGPFPTELFDDVG 287 Query: 290 DFLKEVGKEFGTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGY 349 F++ G E G T R RRCGWLDL ++ S + + IALTK+DVL +D LK+C+GY Sbjct: 288 KFIQHKGGEIGVTTGRIRRCGWLDLPLLKYSAKCSNLTSIALTKVDVLSDMDTLKVCIGY 347 Query: 350 RMDGREVDFLPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEV 409 + +G+E+ + I + EP+ + +E + + ++P + Y++ IE + + Sbjct: 348 KYEGKEI-YCAYPGIDLYKVEPILVEMEPFSIDETVTK--DNMPAALKTYLKTIENHVGI 404 Query: 410 PVALLSIGPERENTLIMSNPFE 431 P++ L+ GP RE L + F+ Sbjct: 405 PISSLAYGPSREQILFFEDYFK 426 >gnl|CDD|179812 PRK04293, PRK04293, adenylosuccinate synthetase; Provisional. Length = 333 Score = 234 bits (599), Expect = 4e-62 Identities = 145/426 (34%), Positives = 198/426 (46%), Gaps = 98/426 (23%) Query: 1 MTNVVVVGLQWGDEGKGKIVDWLS--ENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSG 58 MT +VVG +GDEGKGKI+ +L+ + +I R G NAGHT++ N Y L ++PSG Sbjct: 1 MTCTIVVGGFFGDEGKGKIIAYLALKDKPSIIARGGVGPNAGHTVEYNGKKYGLRMIPSG 60 Query: 59 VVRPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLR 118 V D IG+ V+VDP + E+E L G + + +I H + D Sbjct: 61 FVNKDAKLAIGAGVLVDPEVLLKEVEELNVGG------RVFVDYRCGIIEEKHVEED-RS 113 Query: 119 EGALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSF 178 + LS IG+T G GPA DRV RR ++K +E+L Sbjct: 114 DEHLS---KKIGSTGTGCGPANADRVLRRL----------KLAKDVEEL----------- 149 Query: 179 GEKEVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYP 238 EK L DV + E R G ++L EG QGF L +GTYP Sbjct: 150 ------------------EKYL--TDVPEEVNEALDR-GENVLIEGTQGFGLSLYYGTYP 188 Query: 239 FVTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKE 298 +VTS +T ++ + G+ P + V+ V K+Y TRVG GPFPTEL + + L V E Sbjct: 189 YVTSKDTTASGIASDVGVGPTKVDEVIVVFKSYPTRVGEGPFPTELSLEEAEKLGLV--E 246 Query: 299 FGTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDF 358 +GTVT R+RR G D RR+ ING IA+TKLD LD K Sbjct: 247 YGTVTGRRRRVGPFDFELARRAARINGATQIAITKLDKLD-----KEA------------ 289 Query: 359 LPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGP 418 G+ + LP +A+ +I +IEE L VPV L+S GP Sbjct: 290 -------------------------YGVTEYDKLPPEAKKFIEEIEEELGVPVTLISTGP 324 Query: 419 ERENTL 424 E E+T+ Sbjct: 325 ELEDTI 330 >gnl|CDD|173544 PTZ00351, PTZ00351, adenylosuccinate synthetase; Provisional. Length = 710 Score = 73.9 bits (181), Expect = 8e-14 Identities = 89/327 (27%), Positives = 144/327 (44%), Gaps = 56/327 (17%) Query: 4 VVVVGLQWGDEGKGKIVDWLSEN--ADVIVRFQGGNNAGHTLKVNDIV---YKLSLLPSG 58 ++V G +GDEGKGK VD ++ + I R G NAGHT V D + +L PSG Sbjct: 172 IMVAGAFFGDEGKGKTVDAVAHHPLCTCIARVNSGENAGHT--VYDKAGRKFVFNLAPSG 229 Query: 59 VVRPDKMSIIGSSVVVDPHAFIS-EIESLAHQGICVTPNNLRIANNASLILSIHRDLDML 117 ++ P K + IG V+DP +F+ EI L GI + N ++ H+ LD+L Sbjct: 230 LLLPGKRNYIGPECVMDPVSFMEKEIIQLIDAGI--DYRDRLFIGNVCIVTPYHKLLDLL 287 Query: 118 REGALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDL-TDVEHISKKIEQLLLHHNALR- 175 A S +T +G+ P + +V +R IR+ + D E + K++E+ + + L Sbjct: 288 GSAANS-------STLKGMAPVHGSKVMKRGIRLDHIFNDDETLRKRLEKDMDTYLGLLK 340 Query: 176 -RSFGEKEVLYKTILEE--------------LMYAREKILPFM----------------- 203 ++ + +V+ + EE A++K+ + Sbjct: 341 VKNLSDADVV-RLCREENSDGVVRVPDYVIAFAQAKDKVEFLVKLYRDRVRHNPDFPARC 399 Query: 204 DVIWSLLERESRKGAHILFEGAQGFLLDNDHGTY-PFVTSSNTMSAQASIGSGISPGSL- 261 DV + L R G +L EG Q + L N + TS++T +A S ++ Sbjct: 400 DVTYELHAAVLR-GEKVLLEGPQSYWLSNARTKFWESTTSADTTAAGLLAASQLNFQKFK 458 Query: 262 GYVLGVVKAY-TTRVGGGPFPTELKNQ 287 VL V KA ++RVG G P+ Q Sbjct: 459 SVVLNVHKAPGSSRVGIGACPSSFVPQ 485 >gnl|CDD|178663 PLN03116, PLN03116, ferredoxin--NADP+ reductase; Provisional. Length = 307 Score = 30.1 bits (68), Expect = 1.1 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 4/37 (10%) Query: 193 MYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFL 229 MY ++KI + D I+ LL+ GAHI F G +G + Sbjct: 239 MYVQDKIEEYSDEIFKLLD----NGAHIYFCGLKGMM 271 >gnl|CDD|184471 PRK14039, PRK14039, ADP-dependent glucokinase; Provisional. Length = 453 Score = 30.2 bits (68), Expect = 1.2 Identities = 11/36 (30%), Positives = 17/36 (47%) Query: 357 DFLPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADL 392 + PD S Y + E L+ WK +R+ A+L Sbjct: 224 ETYPDGSTYREKLEDSLAQLKWWKSKNEKLRIHAEL 259 >gnl|CDD|162170 TIGR01041, ATP_syn_B_arch, ATP synthase archaeal, B subunit. Archaeal ATP synthase shares extensive sequence similarity with eukaryotic and prokaryotic V-type (H+)-ATPases. Length = 458 Score = 28.9 bits (65), Expect = 2.7 Identities = 16/31 (51%), Positives = 18/31 (58%) Query: 395 QARNYIRKIEEVLEVPVALLSIGPERENTLI 425 Q RN R IEE L++ LLSI PE E I Sbjct: 412 QGRNENRSIEETLDIGWELLSILPESELKRI 442 >gnl|CDD|179494 PRK02898, PRK02898, cobalt transport protein CbiN; Provisional. Length = 100 Score = 28.4 bits (64), Expect = 3.9 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 4/24 (16%) Query: 247 SAQASIGSGISPGSLGYVLGVVKA 270 + QA++G+GI +GY+LG K Sbjct: 72 ALQAALGAGI----IGYILGYYKG 91 >gnl|CDD|171521 PRK12467, PRK12467, peptide synthase; Provisional. Length = 3956 Score = 28.2 bits (63), Expect = 3.9 Identities = 10/27 (37%), Positives = 18/27 (66%) Query: 156 DVEHISKKIEQLLLHHNALRRSFGEKE 182 D E + ++ LL+HH+ALR F +++ Sbjct: 2214 DAELLEAALQALLVHHDALRLGFVQED 2240 >gnl|CDD|182993 PRK11144, modC, molybdate transporter ATP-binding protein; Provisional. Length = 352 Score = 28.3 bits (64), Expect = 4.4 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 14/53 (26%) Query: 51 KLSL--LPSGVVRPDKMSI-IGSSVVVDPHAFISEIESLAHQGICVTPNNLRI 100 K SL SG+ RP K I + V+ D A +GIC+ P RI Sbjct: 37 KTSLINAISGLTRPQKGRIVLNGRVLFD-----------AEKGICLPPEKRRI 78 >gnl|CDD|147951 pfam06072, Herpes_US9, Alphaherpesvirus tegument protein US9. This family consists of several US9 and related proteins from the Alphaherpesviruses. The function of the US9 protein is unknown although in Bovine herpesvirus 5 Us9 is essential for the anterograde spread of the virus from the olfactory mucosa to the bulb. Length = 60 Score = 27.8 bits (62), Expect = 5.6 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Query: 282 TELKNQT-GDFLKEVGKEFGTVTNRQRRCG 310 +E N+T +FL+ VG+ + R+RRCG Sbjct: 4 SESDNETATEFLRRVGRRQHAIRRRRRRCG 33 >gnl|CDD|128818 smart00545, JmjN, Small domain found in the jumonji family of transcription factors. To date, this domain always co-occurs with the JmjC domain (although the reverse is not true). Length = 42 Score = 27.6 bits (62), Expect = 6.1 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 9/42 (21%) Query: 59 VVRPDKMSIIGSSVVVDPHAFISEIESLAHQ-GIC--VTPNN 97 V P DP A+IS+I A + GIC V P + Sbjct: 4 VFYPTMEEF------KDPLAYISKIRPQAEKYGICKVVPPKS 39 >gnl|CDD|105695 PRK12491, PRK12491, pyrroline-5-carboxylate reductase; Reviewed. Length = 272 Score = 27.3 bits (60), Expect = 7.0 Identities = 55/203 (27%), Positives = 82/203 (40%), Gaps = 58/203 (28%) Query: 90 GICVTPNNLRIANNAS-LILSIHRDL---------DMLREGALS---PCGAHIGTTQRGI 136 GI +T NN +AN+A LILSI DL D ++ + G I +T Sbjct: 50 GITITTNNNEVANSADILILSIKPDLYSSVINQIKDQIKNDVIVVTIAAGKSIKST---- 105 Query: 137 GPAYEDRVGR--RAIRVMDLTDV------------EHISKK-IEQLLLHHNALRRSFGEK 181 E+ R + IRVM T V E +++K I+++L N FG+ Sbjct: 106 ----ENEFDRKLKVIRVMPNTPVLVGEGMSALCFNEMVTEKDIKEVLNIFN----IFGQT 157 Query: 182 EVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEG-AQGFLLDN--DHGTYP 238 EV+ EK+ MDV+ S + S ++ E A +L Y Sbjct: 158 EVV-----------NEKL---MDVVTS-ISGSSPAYVYMFIEAMADAAVLGGMPRKQAYK 202 Query: 239 FVTSSNTMSAQASIGSGISPGSL 261 F + SA+ + +GI PG L Sbjct: 203 FAAQAVLGSAKMVLETGIHPGEL 225 >gnl|CDD|183432 PRK12316, PRK12316, peptide synthase; Provisional. Length = 5163 Score = 27.2 bits (60), Expect = 8.1 Identities = 17/83 (20%), Positives = 34/83 (40%) Query: 148 AIRVMDLTDVEHISKKIEQLLLHHNALRRSFGEKEVLYKTILEELMYAREKILPFMDVIW 207 A+ + + D + + + L+L H LR F E + ++ M R + V Sbjct: 2630 ALHLRGVLDQAALEQAFDALVLRHETLRTRFVEVGEQTRQVILPNMSLRIVLEDCAGVAD 2689 Query: 208 SLLERESRKGAHILFEGAQGFLL 230 + + + + F+ A+G LL Sbjct: 2690 AAIRQRVAEEIQRPFDLARGPLL 2712 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.320 0.139 0.408 Gapped Lambda K H 0.267 0.0663 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 7,295,848 Number of extensions: 491001 Number of successful extensions: 1004 Number of sequences better than 10.0: 1 Number of HSP's gapped: 958 Number of HSP's successfully gapped: 31 Length of query: 432 Length of database: 5,994,473 Length adjustment: 96 Effective length of query: 336 Effective length of database: 3,920,105 Effective search space: 1317155280 Effective search space used: 1317155280 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 59 (26.6 bits)