RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254780613|ref|YP_003065026.1| adenylosuccinate synthetase
[Candidatus Liberibacter asiaticus str. psy62]
         (432 letters)



>1p9b_A Adenylosuccinate synthetase; ligase; HET: IMO GDP; 2.00A
           {Plasmodium falciparum} (A:)
          Length = 442

 Score =  534 bits (1377), Expect = e-153
 Identities = 165/436 (37%), Positives = 236/436 (54%), Gaps = 11/436 (2%)

Query: 1   MTNVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVV 60
              V ++G QWGDEGKGKI+D LSE +D+  RF GG NAGHT+ VND  Y L LLP GV+
Sbjct: 14  GNVVAILGAQWGDEGKGKIIDMLSEYSDITCRFNGGANAGHTISVNDKKYALHLLPCGVL 73

Query: 61  RPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREG 120
             + +S++G+ +V+   + + EIES+  + +      L ++N A ++  IH+ +D ++E 
Sbjct: 74  YDNNISVLGNGMVIHVKSLMEEIESVGGKLLD----RLYLSNKAHILFDIHQIIDSIQET 129

Query: 121 ALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFGE 180
                G  IGTT+RGIGP Y  +  R  IR+  L + E+      +L+ H   L   +  
Sbjct: 130 KKLKEGKQIGTTKRGIGPCYSTKASRIGIRLGTLKNFENFKNMYSKLIDHLMDL---YNI 186

Query: 181 KEVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPFV 240
            E   +  L        K+   +  + S +         +L EGA   +LD D GTYP+V
Sbjct: 187 TEYDKEKELNLFYNYHIKLRDRIVDVISFMNTNLENNKKVLIEGANAAMLDIDFGTYPYV 246

Query: 241 TSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEFG 300
           TSS T       G GI    L  V+GVVK+Y TRVG GPF TEL N  G +L+E G E+G
Sbjct: 247 TSSCTTVGGVFSGLGIHHKKLNLVVGVVKSYLTRVGCGPFLTELNNDVGQYLREKGHEYG 306

Query: 301 TVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMD----GREV 356
           T T R RRCGWLD+  +     IN +  I LTKLDVL GL+E+ +CV ++        E 
Sbjct: 307 TTTKRPRRCGWLDIPMLLYVKCINSIDMINLTKLDVLSGLEEILLCVNFKNKKTGELLEK 366

Query: 357 DFLPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSI 416
              P +      +EPVY    GWK+  +    F +LP  A+ YI  IE+ L+ P+  + +
Sbjct: 367 GCYPVEEEISEEYEPVYEKFSGWKEDISTCNEFDELPENAKKYILAIEKYLKTPIVWIGV 426

Query: 417 GPERENTLIMSNPFED 432
           GP R+N ++  N   +
Sbjct: 427 GPNRKNMIVKKNFNLN 442


>2v40_A Adenylosuccinate synthetase isozyme 2; ligase, purine
           biosynthesis, metal- binding, purine metabolism,
           nucleotide-binding, GDP, ADSS2, magnesium; HET: GDP;
           1.9A {Homo sapiens} PDB: 1iwe_A* 1j4b_A 1lny_A* 1lon_A*
           1loo_A* 1mez_A* 1mf0_A* 1mf1_A* 2dgn_A* (A:)
          Length = 459

 Score =  524 bits (1350), Expect = e-149
 Identities = 170/429 (39%), Positives = 252/429 (58%), Gaps = 8/429 (1%)

Query: 3   NVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVVRP 62
             VV+G QWGDEGKGK+VD L+++AD++ R QGGNNAGHT+ V+ + Y   LLPSG++ P
Sbjct: 33  VTVVLGAQWGDEGKGKVVDLLAQDADIVCRCQGGNNAGHTVVVDSVEYDFHLLPSGIINP 92

Query: 63  DKMSIIGSSVVVDPHAFISEIESLAHQGICV--TPNNLRIANNASLILSIHRDLDMLREG 120
           +  + IG+ VV+       E E    +G  +      L I++ A ++   H+  D ++E 
Sbjct: 93  NVTAFIGNGVVIHLPGLFEEAEKNVQKGKGLEGWEKRLIISDRAHIVFDFHQAADGIQEQ 152

Query: 121 ALS-PCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLT-DVEHISKKIEQLLLHHNALRRSF 178
                 G ++GTT++GIGP Y  +  R  +R+ DL  D +  S++ + L   + ++   +
Sbjct: 153 QRQEQAGKNLGTTKKGIGPVYSSKAARSGLRMCDLVSDFDGFSERFKVLANQYKSI---Y 209

Query: 179 GEKEVLYKTILEELMYAREKILPFM-DVIWSLLERESRKGAHILFEGAQGFLLDNDHGTY 237
              E+  +  L++L    EKI P + D ++ L E        IL EGA   LLD D GTY
Sbjct: 210 PTLEIDIEGELQKLKGYMEKIKPMVRDGVYFLYEALHGPPKKILVEGANAALLDIDFGTY 269

Query: 238 PFVTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGK 297
           PFVTSSN        G G+ P ++G V GVVKAYTTRVG G FPTE  N+ G+ L+  G+
Sbjct: 270 PFVTSSNCTVGGVCTGLGMPPQNVGEVYGVVKAYTTRVGIGAFPTEQDNEIGELLQTRGR 329

Query: 298 EFGTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVD 357
           EFG  T R+RRCGWLDL  ++ + +ING   +ALTKLD+LD   E+K+ V Y++DG  + 
Sbjct: 330 EFGVTTGRKRRCGWLDLVLLKYAHMINGFTALALTKLDILDMFTEIKVGVAYKLDGEIIP 389

Query: 358 FLPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIG 417
            +P +     + E  Y  L GW    +  R F +LP+ A+NY+R IE+ L++PV  + +G
Sbjct: 390 HIPANQEVLNKVEVQYKTLPGWNTDISNARAFKELPVNAQNYVRFIEDELQIPVKWIGVG 449

Query: 418 PERENTLIM 426
             RE+ + +
Sbjct: 450 KSRESMIQL 458


>1dj2_A Adenylosuccinate synthetase; GDP; HET: GDP; 2.90A
           {Arabidopsis thaliana} (A:)
          Length = 443

 Score =  519 bits (1338), Expect = e-148
 Identities = 167/425 (39%), Positives = 248/425 (58%), Gaps = 5/425 (1%)

Query: 3   NVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVND-IVYKLSLLPSGVVR 61
              V+G QWGDEGKGK+VD L+++ D++ R QGG NAGHT+  ++   + L L+PSG++ 
Sbjct: 21  VSGVLGCQWGDEGKGKLVDILAQHFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILN 80

Query: 62  PDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREGA 121
            D   +IG+ VVV       EI+ L   G+      + +++ A L+   H+++D LRE  
Sbjct: 81  EDTTCVIGNGVVVHLPGLFKEIDGLESNGVSCKGR-ILVSDRAHLLFDFHQEVDGLRESE 139

Query: 122 LSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFGEK 181
           L+   + IGTT+RGIGPAY  +V R  IRV DL  ++ + +K++ LL    A  + F   
Sbjct: 140 LA--KSFIGTTKRGIGPAYSSKVIRNGIRVGDLRHMDTLPQKLDLLLSDAAARFQGFKYT 197

Query: 182 EVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYPFVT 241
             + +  +E      +++ P++      +     +   +L EG Q  +LD D GTYPFVT
Sbjct: 198 PEMLREEVEAYKRYADRLEPYITDTVHFINDSISQKKKVLVEGGQATMLDIDFGTYPFVT 257

Query: 242 SSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKEFGT 301
           SS+  +     G GI+P  +G ++GVVKAYTTRVG GPFPTE     GD L+  G+EFGT
Sbjct: 258 SSSPSAGGICTGLGIAPSVVGDLIGVVKAYTTRVGSGPFPTENLGTGGDLLRLAGQEFGT 317

Query: 302 VTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRM-DGREVDFLP 360
            T R RRCGWLD+ +++ S  ING   + LTKLDVL  L+E+++ V Y+  DG  V   P
Sbjct: 318 TTGRPRRCGWLDIVALKFSCQINGFASLNLTKLDVLSDLNEIQLGVAYKRSDGTPVKSFP 377

Query: 361 DDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGPER 420
            D          Y +L GWK   + +R ++DLP  A+ Y+ +IEE++ VP+  + IGP R
Sbjct: 378 GDLRLLEELHVEYEVLPGWKSDISSVRNYSDLPKAAQQYVERIEELVGVPIHYIGIGPGR 437

Query: 421 ENTLI 425
           +  + 
Sbjct: 438 DALIY 442


>2d7u_A Adenylosuccinate synthetase; structural genomics, conserved
           hypothetical protein, NPPSFA; 2.50A {Pyrococcus
           horikoshii OT3} (A:)
          Length = 339

 Score =  389 bits (1001), Expect = e-109
 Identities = 127/432 (29%), Positives = 192/432 (44%), Gaps = 95/432 (21%)

Query: 1   MTNVVVVGLQWGDEGKGKIVDWLS--ENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSG 58
           M +V+VVG QWGDEGKG IV +LS  +  ++I R   G NAGH++ +N   Y +  +P+G
Sbjct: 1   MPSVIVVGGQWGDEGKGSIVAYLSLHDEPEIIARGGVGTNAGHSVVINGKKYAVRQIPTG 60

Query: 59  VVRPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLR 118
            ++     +IG+ V+VDP  F  E+E L    +    + + I    ++I   H+ LD   
Sbjct: 61  FMQTKARLLIGAGVLVDPEVFFHELEQLKDFNV---KDRVGIDYRCAIIEEKHKQLDRTN 117

Query: 119 EGALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSF 178
                     IGTT  G GPA  DRV R+A +  D                         
Sbjct: 118 GYLHGK----IGTTGSGCGPANADRVMRKAKQAKD------------------------- 148

Query: 179 GEKEVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYP 238
                             +++ P++  +   +     +G+ +L EG QGF L   +GTYP
Sbjct: 149 -----------------VKELEPYLTDVAQEINDALDEGSLVLVEGTQGFGLSLYYGTYP 191

Query: 239 FVTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKE 298
           +VTS +  ++  +   GI P  +  V+ V K++ TRVG GPFPTE+  +  D L     E
Sbjct: 192 YVTSKDVTASSVAADVGIGPTRVDEVIVVFKSFPTRVGAGPFPTEMPMEEADRLG--LVE 249

Query: 299 FGTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDF 358
           +GTVT R+RR GW D    R S  ING   +A+T LD                       
Sbjct: 250 YGTVTGRRRRVGWFDFEMARYSARINGATMLAVTMLDK---------------------- 287

Query: 359 LPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGP 418
                               + +   G+  +  LP +A+ +I +IEE + VPV L+  GP
Sbjct: 288 --------------------YDKEAFGVTDYDKLPRKAKEFIEEIEERVGVPVGLIKTGP 327

Query: 419 ERENTLIMSNPF 430
           E E+ +   +  
Sbjct: 328 ELEHIIDRRDTI 339


>3hid_A Adenylosuccinate synthetase; niaid structural genomics,
           virulence associated factor, PURA, purine ribonucleotide
           biosynthesis, cytoplasm; 1.60A {Yersinia pestis CO92}
           PDB: 1kjx_A* 1kkb_A* 1kkf_A* 1ade_A 1adi_A 1cg0_A*
           1ch8_A* 1cib_A* 1gim_A* 1gin_A* 1hon_A* 1hoo_A* 1hop_A*
           1juy_A* 1ksz_A* 1nht_A* 1qf4_A* 1qf5_A* 1son_A* 1soo_A*
           ... (A:1-71,A:217-432)
          Length = 287

 Score =  307 bits (787), Expect = 3e-84
 Identities = 116/214 (54%), Positives = 158/214 (73%), Gaps = 1/214 (0%)

Query: 219 HILFEGAQGFLLDNDHGTYPFVTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGG 278
            I+FEGAQG LLD DHGTYP+VTSSNT +   + GSG+ P  + YVLG+VKAY+TRVG G
Sbjct: 73  LIMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGIVKAYSTRVGAG 132

Query: 279 PFPTELKNQTGDFLKEVGKEFGTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLD 338
           PFPTEL ++TG+FL++ G E+G  T R RR GWLD+ +VRR+V IN + G  +TKLDVLD
Sbjct: 133 PFPTELNDETGEFLRKQGNEYGATTGRSRRTGWLDIVAVRRAVQINSLSGFCMTKLDVLD 192

Query: 339 GLDELKICVGYRM-DGREVDFLPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQAR 397
           GL E+K+CVGYRM DGREVD  P  +      EP+Y  + GW ++T G++  + LP  A 
Sbjct: 193 GLKEVKLCVGYRMPDGREVDTTPLAAEGWEGIEPIYETMPGWSETTFGVKEHSKLPQAAL 252

Query: 398 NYIRKIEEVLEVPVALLSIGPERENTLIMSNPFE 431
           NYI+++EE+  VP+ ++S GP+R+ T+I+ +PF+
Sbjct: 253 NYIQRVEELTGVPIDIISTGPDRDETMILRDPFD 286



 Score =  117 bits (295), Expect = 2e-27
 Identities = 41/73 (56%), Positives = 57/73 (78%)

Query: 2  TNVVVVGLQWGDEGKGKIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSGVVR 61
           NVVV+G QWGDEGKGK+VD L+E A  +VR+QGG+NAGHTL +N     L L+PSG++R
Sbjct: 3  KNVVVLGTQWGDEGKGKVVDLLTERAKYVVRYQGGHNAGHTLVINGEKTVLHLIPSGILR 62

Query: 62 PDKMSIIGSSVVV 74
           + +SIIG+ +++
Sbjct: 63 ENVISIIGNELIM 75


>3hid_A Adenylosuccinate synthetase; niaid structural genomics,
           virulence associated factor, PURA, purine ribonucleotide
           biosynthesis, cytoplasm; 1.60A {Yersinia pestis CO92}
           PDB: 1kjx_A* 1kkb_A* 1kkf_A* 1ade_A 1adi_A 1cg0_A*
           1ch8_A* 1cib_A* 1gim_A* 1gin_A* 1hon_A* 1hoo_A* 1hop_A*
           1juy_A* 1ksz_A* 1nht_A* 1qf4_A* 1qf5_A* 1son_A* 1soo_A*
           ... (A:72-203)
          Length = 132

 Score =  133 bits (335), Expect = 7e-32
 Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 4/133 (3%)

Query: 72  VVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLREGALSPCGAHIGT 131
           VV+ P A + E+  L  +G+ V    L ++    LIL  H  LD  RE A       IGT
Sbjct: 2   VVLAPDALMKEMTELEARGVPVRER-LLLSEACPLILPYHVALDNAREKARG--AKAIGT 58

Query: 132 TQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNA-LRRSFGEKEVLYKTILE 190
           T RGIGPAYED+V RR +RV DL + E  + K+++++ +HN  L   + E  V Y+ +L+
Sbjct: 59  TGRGIGPAYEDKVARRGLRVSDLFNKETFAIKLKEIVEYHNFQLVHYYKEAAVDYQKVLD 118

Query: 191 ELMYAREKILPFM 203
           +++   + +   +
Sbjct: 119 DVLAIADILTAMV 131


>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-
           beta family, alternative splicing, cytoplasm, nucleus,
           phosphoprotein; HET: GTP; 2.92A {Homo sapiens}
           (A:131-241)
          Length = 111

 Score = 27.9 bits (62), Expect = 2.7
 Identities = 6/22 (27%), Positives = 12/22 (54%)

Query: 79  FISEIESLAHQGICVTPNNLRI 100
            + E+++L+ QG   T   + I
Sbjct: 5   MLIELDTLSKQGETQTELVMFI 26


>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha
           helical linker region, 2 tandem 3-helix coiled- coils,
           structural protein; 2.00A {Gallus gallus} (A:)
          Length = 213

 Score = 27.1 bits (59), Expect = 5.0
 Identities = 8/66 (12%), Positives = 19/66 (28%)

Query: 146 RRAIRVMDLTDVEHISKKIEQLLLHHNALRRSFGEKEVLYKTILEELMYAREKILPFMDV 205
           +    ++   D       ++ L   H  L       E   +++L+      +      + 
Sbjct: 17  KEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTIGKEE 76

Query: 206 IWSLLE 211
           I   L 
Sbjct: 77  IQQRLA 82


>3gqn_A Preneck appendage protein; coiled coil, beta helix, beta
           barrel, ATP binding, viral protein; HET: ATP; 2.15A
           {Bacillus phage PHI29} (A:467-604)
          Length = 138

 Score = 26.8 bits (59), Expect = 5.2
 Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 11/63 (17%)

Query: 225 AQGFLLDNDHGTYP------FVTSSNTMSAQ-----ASIGSGISPGSLGYVLGVVKAYTT 273
           ++GF++ +  G          +TSS++ ++      A   +  + G+   +LG + A   
Sbjct: 18  SEGFIMGSTSGCEASVSKSGVLTSSSSKTSSERSLIAGSSTSEAKGTYNTILGSLGAVAD 77

Query: 274 RVG 276
              
Sbjct: 78  EQF 80


>3bzw_A Putative lipase; protein structure initiative II, (PSI-II),
           NYSGXRC, structural genomics; 1.87A {Bacteroides
           thetaiotaomicron vpi-5482} (A:1-107,A:160-274)
          Length = 222

 Score = 27.0 bits (59), Expect = 5.2
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 18  KIVDWLSENADVIVRFQGGNNAGHTLKVNDIVYKLSLLP 56
           K+        D I+ F G N+   ++ ++  +  L+ L 
Sbjct: 80  KLKKEHGGEVDAILVFXGTNDYNSSVPIDKQIVLLTPLH 118


>1a0i_A DNA ligase; DNA replication; HET: DNA ATP; 2.60A
          {Bacteriophage T7} (A:241-348)
          Length = 108

 Score = 26.5 bits (58), Expect = 7.4
 Identities = 7/19 (36%), Positives = 12/19 (63%), Gaps = 3/19 (15%)

Query: 5  VVVGLQWGDEGK---GKIV 20
          ++ GL WG +G    GK++
Sbjct: 7  IIQGLVWGTKGLANEGKVI 25


>1z9t_A Hypothetical UPF0124 protein YFIH; NP_417084.1, structural
           genomics, joint center for structural genomics, JCSG,
           protein structure initiative; HET: CIT; 1.54A
           {Escherichia coli} PDB: 1xaf_A 1u05_A 1rw0_A
           (A:1-170,A:206-255)
          Length = 220

 Score = 26.0 bits (57), Expect = 9.1
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 10/53 (18%)

Query: 266 GVVKAYTTRVGG---GPFPT-ELKNQTGDFLKEVGKEFGTVTNRQRRCGWLDL 314
           GV    +TR+GG    P+ +  L    GD    V +      NR+R     +L
Sbjct: 26  GVAACSSTRIGGVSLPPYDSLNLGAHCGDNPDHVEE------NRKRLFAAGNL 72


>2ekd_A Hypothetical protein PH0250; NPPSFA, national project on
           protein structural and functional analyses; 2.30A
           {Pyrococcus horikoshii OT3} (A:)
          Length = 207

 Score = 26.2 bits (58), Expect = 9.5
 Identities = 7/44 (15%), Positives = 17/44 (38%), Gaps = 3/44 (6%)

Query: 389 FADLPIQARNYIRKIEEVLEVPVALLSIGPERENTLIMSNPFED 432
            +   I  + Y   + ++ + PV    +G  +   LI+     +
Sbjct: 92  ISKYVISEQEYXEIVSQLKDYPVINPVLGLHK---LILLGNTFE 132


>2bdd_A ACP-synthase; structural genomics, structural genomics
           consortium, SGC, transferase; 2.28A {Plasmodium yoelii
           yoelii} (A:)
          Length = 182

 Score = 25.8 bits (56), Expect = 10.0
 Identities = 10/67 (14%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 155 TDVEHISKKIEQLLLHHNALRRSFGEKEV-LYKTILEELMYAREKILPFMDVIWSLLERE 213
           TD+  +++  + L  + N +++     E+  ++T  ++L     K      +   + ++ 
Sbjct: 29  TDILCVNRIYKILEKNINFIKKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKF 88

Query: 214 SRKGAHI 220
           + K A +
Sbjct: 89  AAKEAIL 95


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.320    0.139    0.408 

Gapped
Lambda     K      H
   0.267   0.0514    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 3,401,170
Number of extensions: 161112
Number of successful extensions: 471
Number of sequences better than 10.0: 1
Number of HSP's gapped: 453
Number of HSP's successfully gapped: 27
Length of query: 432
Length of database: 4,956,049
Length adjustment: 91
Effective length of query: 341
Effective length of database: 1,879,794
Effective search space: 641009754
Effective search space used: 641009754
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (25.9 bits)