RPSBLAST alignment of GI: 254780613 and protein with PDBid: 2d7u
>2d7u_A Adenylosuccinate synthetase; structural genomics, conserved hypothetical protein, NPPSFA; 2.50A {Pyrococcus horikoshii OT3} Length = 339
Score = 303 bits (778), Expect = 4e-83
Identities = 129/430 (30%), Positives = 193/430 (44%), Gaps = 95/430 (22%)
Query: 1 MTNVVVVGLQWGDEGKGKIVDWLS--ENADVIVRFQGGNNAGHTLKVNDIVYKLSLLPSG 58
M +V+VVG QWGDEGKG IV +LS + ++I R G NAGH++ +N Y + +P+G
Sbjct: 1 MPSVIVVGGQWGDEGKGSIVAYLSLHDEPEIIARGGVGTNAGHSVVINGKKYAVRQIPTG 60
Query: 59 VVRPDKMSIIGSSVVVDPHAFISEIESLAHQGICVTPNNLRIANNASLILSIHRDLDMLR 118
++ +IG+ V+VDP F E+E L + + + I ++I H+ LD
Sbjct: 61 FMQTKARLLIGAGVLVDPEVFFHELEQLKDFNVK---DRVGIDYRCAIIEEKHKQLDR-- 115
Query: 119 EGALSPCGAHIGTTQRGIGPAYEDRVGRRAIRVMDLTDVEHISKKIEQLLLHHNALRRSF 178
IGTT G GPA DRV R+A + D+ ++E
Sbjct: 116 --TNGYLHGKIGTTGSGCGPANADRVMRKAKQAKDVKELE-------------------- 153
Query: 179 GEKEVLYKTILEELMYAREKILPFMDVIWSLLERESRKGAHILFEGAQGFLLDNDHGTYP 238
P++ + + +G+ +L EG QGF L +GTYP
Sbjct: 154 ----------------------PYLTDVAQEINDALDEGSLVLVEGTQGFGLSLYYGTYP 191
Query: 239 FVTSSNTMSAQASIGSGISPGSLGYVLGVVKAYTTRVGGGPFPTELKNQTGDFLKEVGKE 298
+VTS + ++ + GI P + V+ V K++ TRVG GPFPTE+ + D L E
Sbjct: 192 YVTSKDVTASSVAADVGIGPTRVDEVIVVFKSFPTRVGAGPFPTEMPMEEADRLGL--VE 249
Query: 299 FGTVTNRQRRCGWLDLASVRRSVIINGVKGIALTKLDVLDGLDELKICVGYRMDGREVDF 358
+GTVT R+RR GW D R S ING +A+T LD D
Sbjct: 250 YGTVTGRRRRVGWFDFEMARYSARINGATMLAVTMLDKYD-------------------- 289
Query: 359 LPDDSIYHTRFEPVYMILEGWKQSTAGMRVFADLPIQARNYIRKIEEVLEVPVALLSIGP 418
+ G+ + LP +A+ +I +IEE + VPV L+ GP
Sbjct: 290 ----------------------KEAFGVTDYDKLPRKAKEFIEEIEERVGVPVGLIKTGP 327
Query: 419 ERENTLIMSN 428
E E+ + +
Sbjct: 328 ELEHIIDRRD 337