HHsearch alignment for GI: 254780614 and conserved domain: PRK13450
>PRK13450 atpC F0F1 ATP synthase subunit epsilon; Provisional.
Probab=100.00 E-value=5.4e-34 Score=232.97 Aligned_cols=113 Identities=20% Similarity=0.302 Sum_probs=108.0
Q ss_pred CCEEEEEEECCCCEEECCEEEEEEEEECCCEEEECCCCCEEEEECCCCEEEEEECCCCEEEEECCCCEEEEECCEEEEEE
Q ss_conf 44026999848863752213199996057335776898002667068807996268840354226756999499699998
Q gi|254780614|r 4 VNDLHFELVSPEKCVFSGEVQSVVLPSELGDITVLVGHAPVLTTIKSGIVTISLSCEEIHRYVVIGGICDIVPSHCTVLS 83 (135)
Q Consensus 4 ~~~~~l~ivtP~~~i~~~~v~~v~~p~~~G~~gILp~H~p~i~~L~~G~i~i~~~~~~~~~~~V~gG~~~v~~~~v~Il~ 83 (135)
T Consensus 1 ant~~l~IvTP~~~~~~~~v~~v~~p~~~Ge~gIL~~H~p~it~L~~G~~~i~~~~g~~~~~~v~gGf~ev~~n~vtILa 80 (132)
T PRK13450 1 ANNIKLTIFTPEKNFKIGEVKEVITEGLDGELEILPNHVPMITYLKPTITKIIDENGEKKKIFTSSGILKVENNEVYIIC 80 (132)
T ss_pred CCEEEEEEECCCCCEEEEEEEEEEEECCCCCHHHHHCHHHHHHEECCCEEEEEECCCCEEEEEECCEEEEEECCEEEEEE
T ss_conf 98289999979972895578999998683097336374747426556079999789959999987189999899999995
Q ss_pred ECCEEHHHCCHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 112207685999999999999999650788899
Q gi|254780614|r 84 ETILPMDNACLQALEKRIDEVCSDLNNICDVDQ 116 (135)
Q Consensus 84 ~~a~~~~~iD~~~a~~~~e~a~~~l~~~~~~~~ 116 (135)
T Consensus 81 d~ae~~~eID~~~a~~~~~~Ae~~L~~~~~~d~ 113 (132)
T PRK13450 81 DASEWPEEIDIKRAENAKKRAEERLKNKDEIDV 113 (132)
T ss_pred HHEECHHHCCHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 112836248999999999999999864851459