HHSEARCH alignment of GI: 254780614 and SCOP domain: d1aqta1

Alignment

Probab=92.14  E-value=0.22  Score=26.37  Aligned_cols=43  Identities=2%  Similarity=-0.036  Sum_probs=28.9

Q ss_pred             HHCCHHHHHHHHHHHHHHHHHCCCHHHH----HHHHHHHHHHHHHHH
Q ss_conf             6859999999999999996507888999----999999999999988
Q gi|254780614|r   90 DNACLQALEKRIDEVCSDLNNICDVDQR----FQMEQLLVDLSCLRR  132 (135)
Q Consensus        90 ~~iD~~~a~~~~e~a~~~l~~~~~~~~~----~~~~~~~~~l~~~r~  132 (135)
                      +|||..++++++++|++.|++...+-+.    ..+.+++.+|..++.
T Consensus         1 edlDearA~eAk~~AEe~l~~~~~d~dy~~a~a~La~A~AqL~~i~~   47 (50)
T d1aqta1           1 QDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRVIEL   47 (50)
T ss_dssp             GGCCHHHHHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             91239999999999999987476403499999999999999999998

SCOP domain information

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Epsilon subunit of F1F0-ATP synthase C-terminal domain
family: Epsilon subunit of F1F0-ATP synthase C-terminal domain
domain: Epsilon subunit of F1F0-ATP synthase C-terminal domain
species: Escherichia coli [TaxId: 562]