HHSEARCH alignment of GI: 254780614 and SCOP domain: d1aqta2

Alignment

Probab=99.92  E-value=3.4e-25  Score=175.19  Aligned_cols=85  Identities=32%  Similarity=0.556  Sum_probs=82.0

Q ss_pred             CEEEEEEECCCCEEECCEEEEEEEEECCCEEEECCCCCEEEEECCCCEEEEEECCCCEEEEECCCCEEEEECCEEEEEEE
Q ss_conf             40269998488637522131999960573357768980026670688079962688403542267569994996999981
Q gi|254780614|r    5 NDLHFELVSPEKCVFSGEVQSVVLPSELGDITVLVGHAPVLTTIKSGIVTISLSCEEIHRYVVIGGICDIVPSHCTVLSE   84 (135)
Q Consensus         5 ~~~~l~ivtP~~~i~~~~v~~v~~p~~~G~~gILp~H~p~i~~L~~G~i~i~~~~~~~~~~~V~gG~~~v~~~~v~Il~~   84 (135)
                      +||+|+|+||++.+|+++|++|++|+.+|+|||||||+|+|+.|.||+++|+.++++++.|+|+|||++|.+|+|+||++
T Consensus         1 ~Tf~l~IvtP~~~~~~~~v~~v~~~~~~G~~gIL~~H~p~i~~L~~g~v~i~~~~~~~~~~~v~gG~~~v~~n~v~Il~~   80 (85)
T d1aqta2           1 STYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGNVTVLAD   80 (85)
T ss_dssp             CCEEEEEEESSCEEEEEEEEEEEEEBSSSEEEECTTCCCEEEEECSEEEEEEETTTEEEEEEESSEEEEEETTEEEEEES
T ss_pred             CEEEEEEECCCCEEEEEEEEEEEEECCCCCEEECCCCCCEEEEECCCEEEEEECCCCEEEEEECCCEEEEECCEEEEEEE
T ss_conf             95999999898669965789999977947778968983306882287799998799799999936399998999999992


Q ss_pred             CCEEH
Q ss_conf             12207
Q gi|254780614|r   85 TILPM   89 (135)
Q Consensus        85 ~a~~~   89 (135)
                      .|+..
T Consensus        81 ~A~rg   85 (85)
T d1aqta2          81 TAIRG   85 (85)
T ss_dssp             SEEEG
T ss_pred             EEECC
T ss_conf             53229

SCOP domain information

class: All beta proteins
fold: Epsilon subunit of F1F0-ATP synthase N-terminal domain
superfamily: Epsilon subunit of F1F0-ATP synthase N-terminal domain
family: Epsilon subunit of F1F0-ATP synthase N-terminal domain
domain: Epsilon subunit of F1F0-ATP synthase N-terminal domain
species: Escherichia coli [TaxId: 562]