HHsearch alignment for GI: 254780615 and conserved domain: COG1155
>COG1155 NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion].
Probab=100.00 E-value=0 Score=566.00 Aligned_cols=423 Identities=27% Similarity=0.412 Sum_probs=372.6
Q ss_pred CCEEEEEEECCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEECCCEEEEECCH
Q ss_conf 41389999557899981666523141899816995599999987089879999814878887888889779848988592
Q gi|254780615|r 9 SVGRIQQIMGAVVDVVFVNSLPPIFSSLETSDKGSRIVFEVVQHLGEKTVRCIAMSRTDGLSRGDCVIDTGTQITVPVGE 88 (478)
Q Consensus 9 ~~GrV~~V~G~vvev~g~~~~~~i~~~i~~~~~g~~i~~EVV~~l~e~~V~~i~l~~t~GI~~G~~V~~tg~~l~VpVG~ 88 (478)
T Consensus 1 ~~G~i~~isGp~V~a~gm~~~-~my~~v~Vg--~~~L~gEiI~i-~gd~a~iQVyE~T~Gi~~Ge~V~~Tg~pLsvELGP 76 (588)
T COG1155 1 VMGKIIRISGPVVVAEGMEGA-KMYDVVKVG--EMGLIGEIIRI-EGNRATIQVYEDTAGIRPGEKVENTGRPLSVELGP 76 (588)
T ss_pred CCCEEEEEECCEEEEECCCCC-CEEEEEEEC--CCCEEEEEEEE-ECCEEEEEEEEECCCCCCCCEEECCCCCEEEEECC
T ss_conf 974699987779998057677-417899975--77505899998-58768999996058999998321279822787475
Q ss_pred HHHHHHHHHHHHHCCC----------------------------------------------------------------
Q ss_conf 3765588787523016----------------------------------------------------------------
Q gi|254780615|r 89 ATLGRIMNVIGEPVDD---------------------------------------------------------------- 104 (478)
Q Consensus 89 ~lLGRViD~lG~PLDg---------------------------------------------------------------- 104 (478)
T Consensus 77 Gll~~IyDGiQrPL~~i~e~sg~Fi~RGv~~p~Ldr~~kW~F~P~~~~Gd~V~~GdvlGtV~Et~~i~~imvpp~~~~~~ 156 (588)
T COG1155 77 GLLKSIYDGIQRPLDVIKETSGDFIARGLNPPALDRKKKWDFVPAVKKGDTVYPGDVLGTVQETSLITHRIMVPPGVSGK 156 (588)
T ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCCEEEEEECCCCCCEE
T ss_conf 47764443114747999987401754578899888555200034666698752685489860677357998378877628
Q ss_pred ----------------------CCCC--CCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC
Q ss_conf ----------------------7875--3001100234544410000134200023110023557021541003675666
Q gi|254780615|r 105 ----------------------QGAI--ISSEKRAIHQPSPSYTEQSTDASILTTGIKVIDLISPYQKGGKIGLFGGAGV 160 (478)
Q Consensus 105 ----------------------~g~i--~~~~~~pi~~~~p~~~~R~~i~e~L~TGIkaID~l~pig~Gqr~gIfgg~Gv 160 (478)
T Consensus 157 v~~i~~~G~ytv~d~ia~v~~~~g~~~~~m~~~WPVR~~rp~-~eKl~p~~Pl~TGqRviDt~FPvaKGGTaaiPGpFGs 235 (588)
T COG1155 157 VTWIAEEGEYTVEDVIATVSTEGGEVDVQMMTTWPVRKARPV-KRKLPPEIPLVTGQRVIDTLFPVAKGGTAAVPGPFGS 235 (588)
T ss_pred EEEEECCCCCEEEEEEEEEECCCCEEEEEEEEECCCCCCCCC-CCCCCCCCCCCCCCEEEHHHCCCCCCCCCCCCCCCCC
T ss_conf 999955887156679999952797487888872664677641-0248987752125423101021115765126688889
Q ss_pred CHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHH
Q ss_conf 62489999999885057885268762164345999999854244200122234443323169997176689678777777
Q gi|254780615|r 161 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVAL 240 (478)
Q Consensus 161 GKT~l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~r~~~~~ 240 (478)
T Consensus 236 GKTV~qh~laK~---sdadiVVyigCGERGNEmtevL~eFPeL~D-----p~tg~~lm~RT~liaNTSnMPVAAREasIY 307 (588)
T COG1155 236 GKTVSQHTLSKL---ADGDIVIYVGCGERGNEMTEVLQEFPELKD-----PNTGQPLMDRTVLIANTSNMPVAAREASIY 307 (588)
T ss_pred CCEEHHHHHHHH---CCCCEEEEEECCCCCCHHHHHHHHCCCCCC-----CCCCCCCCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 837524356564---068889998157765238999986866668-----999971200036762576661888664353
Q ss_pred HHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCC-----CC--CCEEEEE
Q ss_conf 7877689998669967999715599987601245531144101101223566657888763177-----76--5325666
Q gi|254780615|r 241 TGLTVAEHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERITTT-----LK--GSITSVQ 313 (478)
Q Consensus 241 ~a~tiAEyfrd~g~dVll~~Dsltr~a~A~rEisl~~g~~P~~~gYp~~~f~~~~~l~ERag~~-----~~--GSIT~~~ 313 (478)
T Consensus 308 tGiTiaEY~RDmGy~v~lmADSTSRWAEAlREisgRleEmPgeegyPaYL~srlA~fYERaG~v~~~~~~~r~GsvtV~g 387 (588)
T COG1155 308 TGITIAEYYRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLGSRLAEFYERAGRVRLVSPEERFGSITVIG 387 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEEC
T ss_conf 22319998876302567750138999999998733500288644441678999999998547234227886258999825
Q ss_pred EEEECCCCCCCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCC------EECCHHHHHHHHHHHHHHHHHH
Q ss_conf 5430476644105899997503425641156631886753223554311162------0128999999999999999899
Q gi|254780615|r 314 AIYVPADDLTDPAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSMLEI------DIVGQEHYDVARRVQEILQRYK 387 (478)
Q Consensus 314 tV~~~~dD~~dpi~~~~~si~Dg~ivLsr~la~~g~~PAId~~~S~Sr~~~~------~i~~~~h~~~a~~~r~~l~~y~ 387 (478)
T Consensus 388 aVSPpGGdfSEPVtq~Tlriv~vFw~Ld~~la~~rhfPaInwl~syS~Y~~~~~~~~~~~v~~~~~~~r~~a~~~Lq~e~ 467 (588)
T COG1155 388 AVSPPGGDFSEPVTQNTLRVVRVFWALDAALANRRHFPSINWLNSYSLYTEDLRSWYDENVSPEWGALRDQAMEILQRES 467 (588)
T ss_pred CCCCCCCCCCCCCCHHEEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 77899998476521100355664200144453232376567377799989888877640258238999999999988779
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHH-HHHCCCCCEEECCCCCCCEEECHHHHHHHHHHHH
Q ss_conf 89999997365569988999999999999-9834997110000578973615999999999997
Q gi|254780615|r 388 SLQDIIAILGMDELSEEDKLVVARARKLE-RFMSQPFHVAESFTGLPGKFVSLEETIRGFKGLV 450 (478)
Q Consensus 388 el~~~i~~~g~~~l~~~~~~~i~r~~~i~-~fL~Qp~~~~e~ft~~~g~~v~~~eti~~~~~il 450 (478)
T Consensus 468 elqeiv~lVG~eal~e~~~~il~va~~ire~fLqQnafd~vD------~~~~~~kq~~mm~~i~ 525 (588)
T COG1155 468 ELQEIVQLVGYDALPEKEKSILDVARIIREDFLQQNAFDEID------AYCSLRKQYLMLKAIM 525 (588)
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC------CCCCHHHHHHHHHHHH
T ss_conf 999999985742366288899999999998887651567310------1388899999999999