HHsearch alignment for GI: 254780615 and conserved domain: COG1156
>COG1156 NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion].
Probab=100.00 E-value=0 Score=565.69 Aligned_cols=431 Identities=26% Similarity=0.367 Sum_probs=386.4
Q ss_pred CCCCCEEEEEEECCEEEEEECCCCCCCCCEEEECC-CCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCE-EEECCCEEE
Q ss_conf 65341389999557899981666523141899816-9955999999870898799998148788878888-897798489
Q gi|254780615|r 6 KTESVGRIQQIMGAVVDVVFVNSLPPIFSSLETSD-KGSRIVFEVVQHLGEKTVRCIAMSRTDGLSRGDC-VIDTGTQIT 83 (478)
Q Consensus 6 ~~~~~GrV~~V~G~vvev~g~~~~~~i~~~i~~~~-~g~~i~~EVV~~l~e~~V~~i~l~~t~GI~~G~~-V~~tg~~l~ 83 (478)
T Consensus 3 ~~~~Y~~i~~i~Gplv~ve~~eg~-~y~E~v~i~~~~G~~r~gqVle-~~~~~a~vQVfegT~Gl~~~~t~vrF~g~~l~ 80 (463)
T COG1156 3 MVKEYTTISEIKGPLIIVEGVEGA-SYGELVEIETPDGEVRRGQVLE-VRGDKAVVQVFEGTSGLDTKGTTVRFTGETLK 80 (463)
T ss_pred CCCEEEEEEEECCCEEEEECCCCC-CCCEEEEEECCCCCEEEEEEEE-CCCCEEEEEEEECCCCCCCCCCEEEEECCEEE
T ss_conf 542023467731544999645677-7643799987998764345753-15864899995044577888855899486378
Q ss_pred EECCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHH
Q ss_conf 88592376558878752301678753001100234544410000134200023110023557021541003675666624
Q gi|254780615|r 84 VPVGEATLGRIMNVIGEPVDDQGAIISSEKRAIHQPSPSYTEQSTDASILTTGIKVIDLISPYQKGGKIGLFGGAGVGKT 163 (478)
Q Consensus 84 VpVG~~lLGRViD~lG~PLDg~g~i~~~~~~pi~~~~p~~~~R~~i~e~L~TGIkaID~l~pig~Gqr~gIfgg~GvGKT 163 (478)
T Consensus 81 i~vs~dllGRifnG~G~PiDggp~i~~e~~~dI~g~~~NP~aR~yP~efIqTgIsaIDg~NtLvrgQKlPIFSgSGlphN 160 (463)
T COG1156 81 IPVSEDLLGRIFNGSGKPIDGGPEIVPEDRLDINGAPINPYARIYPEEFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHN 160 (463)
T ss_pred EEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHH
T ss_conf 76328766544057888478998678775533578878915654726676529608764346533654660127998437
Q ss_pred HHHHHHHHHHHHCC----CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
Q ss_conf 89999999885057----88526876216434599999985424420012223444332316999717668967877777
Q gi|254780615|r 164 VLIMELINNVAKAH----GGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVA 239 (478)
Q Consensus 164 ~l~~~~i~n~~~~~----~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~r~~~~ 239 (478)
T Consensus 161 ~LaaqIarQ-A~v~~~~e~favVfaamGit~eea~fF~~~fe~------------tGal~r~vlflnlA~dp~vEri~tP 227 (463)
T COG1156 161 ELAAQIARQ-ATVDGEEEEFAVVFAAMGITHEEALFFMDEFEE------------TGALDRAVLFLNLADDPAVERIITP 227 (463)
T ss_pred HHHHHHHHH-CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHH------------HHHHHHHHHHHHCCCCCCEEEECCH
T ss_conf 999999975-366787543058874047318999999988876------------2246666765423678743476131
Q ss_pred HHHHHHHHHHHH-CCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCC--CCCCEEEEEEEE
Q ss_conf 778776899986-69967999715599987601245531144101101223566657888763177--765325666543
Q gi|254780615|r 240 LTGLTVAEHFRD-QGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERITTT--LKGSITSVQAIY 316 (478)
Q Consensus 240 ~~a~tiAEyfrd-~g~dVll~~Dsltr~a~A~rEisl~~g~~P~~~gYp~~~f~~~~~l~ERag~~--~~GSIT~~~tV~ 316 (478)
T Consensus 228 r~aLt~AEylA~e~~~hVLVilTDMTnyceALREIsaareeVPgrRGYPGymYTdLatiYErAg~i~g~~GSiTqipIlT 307 (463)
T COG1156 228 RMALTVAEYLAFEKDMHVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGSITQIPILT 307 (463)
T ss_pred HHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCEECCCCCCEEEEEEEE
T ss_conf 68999999985257866999970146789999998764143777678861667788999876503305787269877652
Q ss_pred ECCCCCCCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCEECC-----HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 04766441058999975034256411566318867532235543111620128-----9999999999999998998999
Q gi|254780615|r 317 VPADDLTDPAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSMLEIDIVG-----QEHYDVARRVQEILQRYKSLQD 391 (478)
Q Consensus 317 ~~~dD~~dpi~~~~~si~Dg~ivLsr~la~~g~~PAId~~~S~Sr~~~~~i~~-----~~h~~~a~~~r~~l~~y~el~~ 391 (478)
T Consensus 308 MP~DDITHPIPDlTGYITEGQivl~r~l~~~gIyPpi~vlpSLSRL~~~-giG~g~TReDH~~~snql~a~YA~g~d~r~ 386 (463)
T COG1156 308 MPGDDITHPIPDLTGYITEGQIVLSRDLHRKGIYPPINVLPSLSRLMKD-GIGEGKTREDHGDVSNQLYAAYAEGRDLRE 386 (463)
T ss_pred CCCCCCCCCCCCCCCEECCCEEEEEHHCCCCCCCCCCCCCCCHHHHHHC-CCCCCCCCCCCHHHHHHHHHHHHCCHHHHH
T ss_conf 6998767877765553316559997100248867972336127777651-447886644107889999999850240899
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHH-HHHCCCCCEEECCCCCCCEEECHHHHHHHHHHHHCCCCCCCCHHHHHHCC
Q ss_conf 9997365569988999999999999-98349971100005789736159999999999976764468978976418
Q gi|254780615|r 392 IIAILGMDELSEEDKLVVARARKLE-RFMSQPFHVAESFTGLPGKFVSLEETIRGFKGLVQGEYDHLPELAFYMVG 466 (478)
Q Consensus 392 ~i~~~g~~~l~~~~~~~i~r~~~i~-~fL~Qp~~~~e~ft~~~g~~v~~~eti~~~~~il~g~~d~~pe~~~~~~g 466 (478)
T Consensus 387 l~avvge~aLs~~D~~~l~F~d~FE~~fi~qg~~enr----------sieetLdlgW~lL~----~lp~~el~ri~ 448 (463)
T COG1156 387 LVAVVGEEALSERDRKYLKFADLFEQRFIKQGRYENR----------SIEETLDLGWELLS----ILPESELTRIK 448 (463)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC----------CHHHHHHHHHHHHH----HCCHHHHCCCC
T ss_conf 9987524430335799999999999999863432477----------88999887589987----48787761577