HHsearch alignment for GI: 254780615 and conserved domain: COG3854
>COG3854 SpoIIIAA ncharacterized protein conserved in bacteria [Function unknown].
Probab=92.51 E-value=0.12 Score=29.64 Aligned_cols=39 Identities=21% Similarity=0.340 Sum_probs=27.6
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHHCCCCC--EEEEEECCCH
Q ss_conf 00367566662489999999885057885--2687621643
Q gi|254780615|r 152 IGLFGGAGVGKTVLIMELINNVAKAHGGY--SVFAGVGERT 190 (478)
Q Consensus 152 ~gIfgg~GvGKT~l~~~~i~n~~~~~~~v--~V~~~iGER~ 190 (478)
T Consensus 140 tLiigpP~~GKTTlLRdiaR~~s~g~~~~l~kkv~IiDers 180 (308)
T COG3854 140 TLIIGPPQVGKTTLLRDIARLLSDGINQFLPKKVGIIDERS 180 (308)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC
T ss_conf 69965998870779999999863151126773289971500