HHsearch alignment for GI: 254780615 and conserved domain: COG4172

Probab=95.11  E-value=0.012  Score=36.14  Aligned_cols=126  Identities=19%  Similarity=0.288  Sum_probs=67.5

Q ss_pred             CCCCCCC-CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             1100235-570215410036756666248999999988505788526876216434599999985424420012223444
Q gi|254780615|r  137 IKVIDLI-SPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGS  215 (478)
Q Consensus       137 IkaID~l-~pig~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~  215 (478)
T Consensus       300 ~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL-~~s~-G~I~F~G~~i~~~~~~~----mr--------------  359 (534)
T COG4172         300 LRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRL-IPSQ-GEIRFDGQDIDGLSRKE----MR--------------  359 (534)
T ss_pred             EEEECCCEEEECCCCEEEEEECCCCCCCHHHHHHHHH-CCCC-CEEEECCCCCCCCCHHH----HH--------------
T ss_conf             0775254367538976777705889811599999852-4768-63897881166648566----20--------------


Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCHH
Q ss_conf             33231699971766896787777777877689998669967999715599987601245531144101101223
Q gi|254780615|r  216 AVGSKCSLLYGQMNEPPGARSRVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQST  289 (478)
Q Consensus       216 ~~~~~tv~v~~~~~~~~~~r~~~~~~a~tiAEyfrd~g~dVll~~Dsltr~a~A~rEisl~~g~~P~~~gYp~~  289 (478)
T Consensus       360 plR~~mQvVFQDPygSLsPRmt---V~qII~EGL~vh~~~-ls~~eR~~rv~~aL~EVGL---Dp~~r~RYPhE  426 (534)
T COG4172         360 PLRRRMQVVFQDPYGSLSPRMT---VGQIIEEGLRVHEPK-LSAAERDQRVIEALEEVGL---DPATRNRYPHE  426 (534)
T ss_pred             HHHHHCEEEEECCCCCCCCCCC---HHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHCCC---CHHHHHCCCCC
T ss_conf             3555226997178777884348---999864214115878-9878899999999998299---94575238865