HHsearch alignment for GI: 254780615 and conserved domain: KOG1433

Probab=90.56  E-value=1.1  Score=23.45  Aligned_cols=121  Identities=21%  Similarity=0.173  Sum_probs=66.4

Q ss_pred             HHHCCCCCCCCCCCCCCCCCCC--CCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEE-EEC-CCHHHHHHHHHH
Q ss_conf             0000134200023110023557--021541003675666624899999998850578852687-621-643459999998
Q gi|254780615|r  124 TEQSTDASILTTGIKVIDLISP--YQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFA-GVG-ERTREGNDLYHE  199 (478)
Q Consensus       124 ~~R~~i~e~L~TGIkaID~l~p--ig~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~-~iG-ER~rEv~e~~~e  199 (478)
T Consensus        84 ~~~~~~~~~l~Tg~~~lD~lL~gGi~~g~~TEi~G~p~~GKtQlc~~~~v~~-~gge~~~l~IDs~s~~~~~~~~~ia~~  162 (326)
T KOG1433          84 LQLRSELGFLSTGSKALDKLLGGGIETGSLTELVGPPGSGKTQLCHTLAVTC-GGGEGKVLYIDTESTFRLERLTEIAGR  162 (326)
T ss_pred             HHHHCCCEEECCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHC-CCCCCEEEEEECCHHCCCCHHHHHHHH
T ss_conf             9861676254155055667742675558356885589844778888998870-687511899952111033211356666


Q ss_pred             HHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH---HHHHHHHHHHHHCCCCEEEEEECHHH
Q ss_conf             5424420012223444332316999717668967877777---77877689998669967999715599
Q gi|254780615|r  200 MIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVA---LTGLTVAEHFRDQGQDVLFFVDNIFR  265 (478)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~r~~~~---~~a~tiAEyfrd~g~dVll~~Dsltr  265 (478)
T Consensus       163 ~~~-------------~~~~-------~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~l~~vds~ta  211 (326)
T KOG1433         163 SGL-------------RGRD-------TLSNLMLARAYNLDHQLQLIQEAEIMINQSRVKLLIVDSATA  211 (326)
T ss_pred             HHH-------------HHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             303-------------0677-------888889999985666777799999986203116999413454