HHsearch alignment for GI: 254780615 and conserved domain: PRK00411
>PRK00411 cdc6 cell division control protein 6; Reviewed.
Probab=95.49 E-value=0.13 Score=29.52 Aligned_cols=108 Identities=17% Similarity=0.289 Sum_probs=60.2
Q ss_pred CCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCC-CEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 215410036756666248999999988505788-5268762164345999999854244200122234443323169997
Q gi|254780615|r 147 QKGGKIGLFGGAGVGKTVLIMELINNVAKAHGG-YSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLY 225 (478)
Q Consensus 147 g~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~-v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~ 225 (478)
T Consensus 53 ~~~~n~~I~G~pGTGKT~~vk~v~~~l~~~~~~~~~vyINc-~~~~t~~~i~~~i~~~L~--------~~---------- 113 (394)
T PRK00411 53 SRPSNVLILGPPGTGKTTTVKKVFEELEEAALKVVYVYINC-QIDRTRYAILSEIARSLF--------GH---------- 113 (394)
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC-CCCCCHHHHHHHHHHHHC--------CC----------
T ss_conf 99984799889999899999999999997468965999969-668989999999999956--------99----------
Q ss_pred ECCCCCHHHHHHHHHHHHHHH-------HHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHH
Q ss_conf 176689678777777787768-------9998669967999715599987601245531144101101223566657888
Q gi|254780615|r 226 GQMNEPPGARSRVALTGLTVA-------EHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQ 298 (478)
Q Consensus 226 ~~~~~~~~~r~~~~~~a~tiA-------Eyfrd~g~dVll~~Dsltr~a~A~rEisl~~g~~P~~~gYp~~~f~~~~~l~ 298 (478)
T Consensus 114 -----~------~p~~G~s~~~~~~~l~~~l~~~~~~~ivvLDEiD~L~~----------------~~~~~vLY~L~r~~ 166 (394)
T PRK00411 114 -----P------PPSSGLSFDELFDKIAEYLDERDRVLIVALDDINYLVE----------------KEGNDVLYSLLRAH 166 (394)
T ss_pred -----C------CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC----------------CCCCHHHHHHHHCC
T ss_conf -----8------98778789999999999861669758999965540203----------------66508999998540
Q ss_pred HH
Q ss_conf 76
Q gi|254780615|r 299 ER 300 (478)
Q Consensus 299 ER 300 (478)
T Consensus 167 ~~ 168 (394)
T PRK00411 167 EE 168 (394)
T ss_pred CC
T ss_conf 22