HHsearch alignment for GI: 254780615 and conserved domain: PRK05642
>PRK05642 DNA replication initiation factor; Validated.
Probab=92.44 E-value=0.22 Score=27.95 Aligned_cols=35 Identities=26% Similarity=0.427 Sum_probs=24.4
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 003675666624899999998850578852687621
Q gi|254780615|r 152 IGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 187 (478)
Q Consensus 152 ~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~~iG 187 (478)
T Consensus 48 l~i~G~~G~GKTHLL~A~~~~~~-~~~~~~~yl~~~ 82 (234)
T PRK05642 48 IYLWGKDGVGRSHLLQAACLRFE-QRGEPAVYLPLA 82 (234)
T ss_pred EEEECCCCCCHHHHHHHHHHHHH-HCCCCEEEEEHH
T ss_conf 89988999988999999999998-079967997899