HHsearch alignment for GI: 254780615 and conserved domain: PRK05922
>PRK05922 type III secretion system ATPase; Validated.
Probab=100.00 E-value=0 Score=919.90 Aligned_cols=420 Identities=24% Similarity=0.362 Sum_probs=396.5
Q ss_pred CCCCCCCEEEEEEECCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEECCCEEE
Q ss_conf 45653413899995578999816665231418998169955999999870898799998148788878888897798489
Q gi|254780615|r 4 KAKTESVGRIQQIMGAVVDVVFVNSLPPIFSSLETSDKGSRIVFEVVQHLGEKTVRCIAMSRTDGLSRGDCVIDTGTQIT 83 (478)
Q Consensus 4 ~~~~~~~GrV~~V~G~vvev~g~~~~~~i~~~i~~~~~g~~i~~EVV~~l~e~~V~~i~l~~t~GI~~G~~V~~tg~~l~ 83 (478)
T Consensus 14 ~~p~r~~GrV~~V~G~~ie~~g~~~~iGelc~I~~~~-~~~i~aeVvgf-~~~~~~l~p~~~~~Gi~~G~~V~~~g~~~~ 91 (434)
T PRK05922 14 WQPYRECGLLSRVSGNLLEAQGLSACLGELCQISLPK-SPPILAEVIGF-HNQTTLLMSLSPIHYVALGAEVLPLRRPPS 91 (434)
T ss_pred CCCCEEEEEEEEEECEEEEEEECCCCCCCEEEEEECC-CCEEEEEEEEE-ECCEEEEEECCCCCCCCCCCEEEECCCCCE
T ss_conf 7985446799999664999980687879859998189-98789999987-299799997777667899999998999876
Q ss_pred EECCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHH
Q ss_conf 88592376558878752301678753001100234544410000134200023110023557021541003675666624
Q gi|254780615|r 84 VPVGEATLGRIMNVIGEPVDDQGAIISSEKRAIHQPSPSYTEQSTDASILTTGIKVIDLISPYQKGGKIGLFGGAGVGKT 163 (478)
Q Consensus 84 VpVG~~lLGRViD~lG~PLDg~g~i~~~~~~pi~~~~p~~~~R~~i~e~L~TGIkaID~l~pig~Gqr~gIfgg~GvGKT 163 (478)
T Consensus 92 v~vg~~lLGRVld~~G~PiDg~~~~~~~~~~~i~~~~p~p~~R~~i~e~L~TGIraID~l~pigrGQR~gIf~g~GvGKt 171 (434)
T PRK05922 92 LHLSDHLLGRVLDGFGNPLDGKEQLPKTHLKPLFSPPPSPMSRQPIQEIFPTGIKAIDAFLTLGKGQRIGVFSEPGSGKS 171 (434)
T ss_pred EECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCHH
T ss_conf 77680614657268846448999999876052458994822216888755478556735677246767773079999789
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 89999999885057885268762164345999999854244200122234443323169997176689678777777787
Q gi|254780615|r 164 VLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVALTGL 243 (478)
Q Consensus 164 ~l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~r~~~~~~a~ 243 (478)
T Consensus 172 ~Ll~~ia~~---~~~~v~V~alIGeR~rEv~efie~~~~------------~~~~~~tvvv~atsd~p~~~r~~a~~~a~ 236 (434)
T PRK05922 172 SLLSTIAKG---SKSTINVIALIGERGREVREYIEQHKE------------GLKAQRTIIIASPAHETAPTKVIAGRAAM 236 (434)
T ss_pred HHHHHHHHC---CCCCEEEEEEEEEEHHHHHHHHHHHHH------------CCCCCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 999867653---678759998455138999999998661------------34521037875037788788899998876
Q ss_pred HHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCC
Q ss_conf 76899986699679997155999876012455311441011012235666578887631777653256665430476644
Q gi|254780615|r 244 TVAEHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERITTTLKGSITSVQAIYVPADDLT 323 (478)
Q Consensus 244 tiAEyfrd~g~dVll~~Dsltr~a~A~rEisl~~g~~P~~~gYp~~~f~~~~~l~ERag~~~~GSIT~~~tV~~~~dD~~ 323 (478)
T Consensus 237 aiAEyfrd~G~~VLl~~Dsltr~A~A~REisl~~gepP~~~gYp~svf~~l~~L~ERag~~~~GSITa~~tVl~~~~~-~ 315 (434)
T PRK05922 237 TIAEYFRDQGHRVLFIMDSLSRWIAALQEVALARGETLSAHHYAASVFHHVSEFTERAGNNDKGSITALYAILHYPNH-P 315 (434)
T ss_pred HHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC-C
T ss_conf 799999977996799954788999999899986489998768894499987888860437999655649899853898-7
Q ss_pred CHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 10589999750342564115663188675322355431116201289999999999999998998999999736556998
Q gi|254780615|r 324 DPAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSMLEIDIVGQEHYDVARRVQEILQRYKSLQDIIAILGMDELSE 403 (478)
Q Consensus 324 dpi~~~~~si~Dg~ivLsr~la~~g~~PAId~~~S~Sr~~~~~i~~~~h~~~a~~~r~~l~~y~el~~~i~~~g~~~l~~ 403 (478)
T Consensus 316 dpi~d~~~silDGhIvLsr~-~~~~~~PAIDvl~S~SR~~~-~~~~~~h~~~a~~~r~~la~y~e~~dli~~G~y~~g~d 393 (434)
T PRK05922 316 DIFTDYLKSLLDGHFFLTPQ-GKALASPPIDILTSLSRSAR-QLALPHHYAAAEELRSLLKAYHEALDIIQLGAYTPGQD 393 (434)
T ss_pred CCCCCCCHHHEEEEEEECHH-HHHCCCCCCCCCCCHHHCCH-HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 65677333022224675354-66157897565667645142-33569999999999999999999999998529767887
Q ss_pred HH-HHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECHHHHHHHHHHHHCCC
Q ss_conf 89-999999999999834997110000578973615999999999997676
Q gi|254780615|r 404 ED-KLVVARARKLERFMSQPFHVAESFTGLPGKFVSLEETIRGFKGLVQGE 453 (478)
Q Consensus 404 ~~-~~~i~r~~~i~~fL~Qp~~~~e~ft~~~g~~v~~~eti~~~~~il~g~ 453 (478)
T Consensus 394 ~~~D~ai~~~~~i~~fL~Q~~~----------e~~~~~~t~~~l~~l~~~e 434 (434)
T PRK05922 394 AHLDRAVKLLPSIKQFLSQPLS----------SYCALHNTLKQLEALLKHE 434 (434)
T ss_pred HHHHHHHHHHHHHHHHCCCCCC----------CCCCHHHHHHHHHHHHCCC
T ss_conf 6699999999999997189999----------9739999999999987489