HHsearch alignment for GI: 254780615 and conserved domain: PRK05922

>PRK05922 type III secretion system ATPase; Validated.
Probab=100.00  E-value=0  Score=919.90  Aligned_cols=420  Identities=24%  Similarity=0.362  Sum_probs=396.5

Q ss_pred             CCCCCCCEEEEEEECCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEECCCEEE
Q ss_conf             45653413899995578999816665231418998169955999999870898799998148788878888897798489
Q gi|254780615|r    4 KAKTESVGRIQQIMGAVVDVVFVNSLPPIFSSLETSDKGSRIVFEVVQHLGEKTVRCIAMSRTDGLSRGDCVIDTGTQIT   83 (478)
Q Consensus         4 ~~~~~~~GrV~~V~G~vvev~g~~~~~~i~~~i~~~~~g~~i~~EVV~~l~e~~V~~i~l~~t~GI~~G~~V~~tg~~l~   83 (478)
T Consensus        14 ~~p~r~~GrV~~V~G~~ie~~g~~~~iGelc~I~~~~-~~~i~aeVvgf-~~~~~~l~p~~~~~Gi~~G~~V~~~g~~~~   91 (434)
T PRK05922         14 WQPYRECGLLSRVSGNLLEAQGLSACLGELCQISLPK-SPPILAEVIGF-HNQTTLLMSLSPIHYVALGAEVLPLRRPPS   91 (434)
T ss_pred             CCCCEEEEEEEEEECEEEEEEECCCCCCCEEEEEECC-CCEEEEEEEEE-ECCEEEEEECCCCCCCCCCCEEEECCCCCE
T ss_conf             7985446799999664999980687879859998189-98789999987-299799997777667899999998999876


Q ss_pred             EECCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHH
Q ss_conf             88592376558878752301678753001100234544410000134200023110023557021541003675666624
Q gi|254780615|r   84 VPVGEATLGRIMNVIGEPVDDQGAIISSEKRAIHQPSPSYTEQSTDASILTTGIKVIDLISPYQKGGKIGLFGGAGVGKT  163 (478)
Q Consensus        84 VpVG~~lLGRViD~lG~PLDg~g~i~~~~~~pi~~~~p~~~~R~~i~e~L~TGIkaID~l~pig~Gqr~gIfgg~GvGKT  163 (478)
T Consensus        92 v~vg~~lLGRVld~~G~PiDg~~~~~~~~~~~i~~~~p~p~~R~~i~e~L~TGIraID~l~pigrGQR~gIf~g~GvGKt  171 (434)
T PRK05922         92 LHLSDHLLGRVLDGFGNPLDGKEQLPKTHLKPLFSPPPSPMSRQPIQEIFPTGIKAIDAFLTLGKGQRIGVFSEPGSGKS  171 (434)
T ss_pred             EECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCHH
T ss_conf             77680614657268846448999999876052458994822216888755478556735677246767773079999789


Q ss_pred             HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf             89999999885057885268762164345999999854244200122234443323169997176689678777777787
Q gi|254780615|r  164 VLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVALTGL  243 (478)
Q Consensus       164 ~l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~r~~~~~~a~  243 (478)
T Consensus       172 ~Ll~~ia~~---~~~~v~V~alIGeR~rEv~efie~~~~------------~~~~~~tvvv~atsd~p~~~r~~a~~~a~  236 (434)
T PRK05922        172 SLLSTIAKG---SKSTINVIALIGERGREVREYIEQHKE------------GLKAQRTIIIASPAHETAPTKVIAGRAAM  236 (434)
T ss_pred             HHHHHHHHC---CCCCEEEEEEEEEEHHHHHHHHHHHHH------------CCCCCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf             999867653---678759998455138999999998661------------34521037875037788788899998876


Q ss_pred             HHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCC
Q ss_conf             76899986699679997155999876012455311441011012235666578887631777653256665430476644
Q gi|254780615|r  244 TVAEHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERITTTLKGSITSVQAIYVPADDLT  323 (478)
Q Consensus       244 tiAEyfrd~g~dVll~~Dsltr~a~A~rEisl~~g~~P~~~gYp~~~f~~~~~l~ERag~~~~GSIT~~~tV~~~~dD~~  323 (478)
T Consensus       237 aiAEyfrd~G~~VLl~~Dsltr~A~A~REisl~~gepP~~~gYp~svf~~l~~L~ERag~~~~GSITa~~tVl~~~~~-~  315 (434)
T PRK05922        237 TIAEYFRDQGHRVLFIMDSLSRWIAALQEVALARGETLSAHHYAASVFHHVSEFTERAGNNDKGSITALYAILHYPNH-P  315 (434)
T ss_pred             HHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC-C
T ss_conf             799999977996799954788999999899986489998768894499987888860437999655649899853898-7


Q ss_pred             CHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
Q ss_conf             10589999750342564115663188675322355431116201289999999999999998998999999736556998
Q gi|254780615|r  324 DPAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSMLEIDIVGQEHYDVARRVQEILQRYKSLQDIIAILGMDELSE  403 (478)
Q Consensus       324 dpi~~~~~si~Dg~ivLsr~la~~g~~PAId~~~S~Sr~~~~~i~~~~h~~~a~~~r~~l~~y~el~~~i~~~g~~~l~~  403 (478)
T Consensus       316 dpi~d~~~silDGhIvLsr~-~~~~~~PAIDvl~S~SR~~~-~~~~~~h~~~a~~~r~~la~y~e~~dli~~G~y~~g~d  393 (434)
T PRK05922        316 DIFTDYLKSLLDGHFFLTPQ-GKALASPPIDILTSLSRSAR-QLALPHHYAAAEELRSLLKAYHEALDIIQLGAYTPGQD  393 (434)
T ss_pred             CCCCCCCHHHEEEEEEECHH-HHHCCCCCCCCCCCHHHCCH-HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             65677333022224675354-66157897565667645142-33569999999999999999999999998529767887


Q ss_pred             HH-HHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECHHHHHHHHHHHHCCC
Q ss_conf             89-999999999999834997110000578973615999999999997676
Q gi|254780615|r  404 ED-KLVVARARKLERFMSQPFHVAESFTGLPGKFVSLEETIRGFKGLVQGE  453 (478)
Q Consensus       404 ~~-~~~i~r~~~i~~fL~Qp~~~~e~ft~~~g~~v~~~eti~~~~~il~g~  453 (478)
T Consensus       394 ~~~D~ai~~~~~i~~fL~Q~~~----------e~~~~~~t~~~l~~l~~~e  434 (434)
T PRK05922        394 AHLDRAVKLLPSIKQFLSQPLS----------SYCALHNTLKQLEALLKHE  434 (434)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCC----------CCCCHHHHHHHHHHHHCCC
T ss_conf             6699999999999997189999----------9739999999999987489