HHsearch alignment for GI: 254780615 and conserved domain: PRK06526
>PRK06526 transposase; Provisional.
Probab=95.99 E-value=0.03 Score=33.65 Aligned_cols=52 Identities=21% Similarity=0.273 Sum_probs=34.9
Q ss_pred CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEE-EEEECCCHHHHHHHHHHHH
Q ss_conf 235570215410036756666248999999988505788526-8762164345999999854
Q gi|254780615|r 141 DLISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSV-FAGVGERTREGNDLYHEMI 201 (478)
Q Consensus 141 D~l~pig~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V-~~~iGER~rEv~e~~~e~~ 201 (478)
T Consensus 90 a~~~fi~~~~Nvil~G~~GtGKThLA~Alg~~A~~--~G~~v~f~~-------~~~L~~~L~ 142 (254)
T PRK06526 90 GTLDFVTGKENVVFLGPPGTGKTHLAIGLGIRACQ--AGHRVLFAT-------AAQWVARLA 142 (254)
T ss_pred HCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH--CCCCEEEEE-------HHHHHHHHH
T ss_conf 63717765887899899998689999999999998--699679987-------799999999