HHsearch alignment for GI: 254780615 and conserved domain: PRK07261
>PRK07261 topology modulation protein; Provisional.
Probab=91.96 E-value=0.1 Score=30.11 Aligned_cols=49 Identities=22% Similarity=0.314 Sum_probs=31.4
Q ss_pred CEECCCCCCCCHHHHHHHHHHHHH--HCCCCCEEEEEECCCHHHHHHHHHHH
Q ss_conf 100367566662489999999885--05788526876216434599999985
Q gi|254780615|r 151 KIGLFGGAGVGKTVLIMELINNVA--KAHGGYSVFAGVGERTREGNDLYHEM 200 (478)
Q Consensus 151 r~gIfgg~GvGKT~l~~~~i~n~~--~~~~~v~V~~~iGER~rEv~e~~~e~ 200 (478)
T Consensus 2 rI~IiG~sGsGKSTlAr~L~~~~~ip~~~LD-~l~w~p~w~~~~~~e~~~~~ 52 (171)
T PRK07261 2 KIAIIGYSGSGKSTLARFLGQHYNCPVLHLD-QLHFSSNWQERDDDDMIADI 52 (171)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEEEC-CEEECCCCEECCHHHHHHHH
T ss_conf 8999889998689999999998797979702-27888999888899999999