HHsearch alignment for GI: 254780615 and conserved domain: PRK08084

>PRK08084 DNA replication initiation factor; Provisional.
Probab=94.27  E-value=0.1  Score=30.08  Aligned_cols=42  Identities=21%  Similarity=0.426  Sum_probs=28.6

Q ss_pred             CCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCH
Q ss_conf             1541003675666624899999998850578852687621643
Q gi|254780615|r  148 KGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT  190 (478)
Q Consensus       148 ~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~~iGER~  190 (478)
T Consensus        44 ~~~~l~l~G~~G~GKTHLLqA~~~~~~-~~~~~~~yl~~~~~~   85 (235)
T PRK08084         44 HSGYIYLWGREGAGRSHLLHAACAELS-QRGDAVGYVPLDKRA   85 (235)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHH-CCCCCEEEEEHHHHH
T ss_conf             987699989999888999999999997-079857998779866