HHsearch alignment for GI: 254780615 and conserved domain: PRK08084
>PRK08084 DNA replication initiation factor; Provisional.
Probab=94.27 E-value=0.1 Score=30.08 Aligned_cols=42 Identities=21% Similarity=0.426 Sum_probs=28.6
Q ss_pred CCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCH
Q ss_conf 1541003675666624899999998850578852687621643
Q gi|254780615|r 148 KGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 190 (478)
Q Consensus 148 ~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~~iGER~ 190 (478)
T Consensus 44 ~~~~l~l~G~~G~GKTHLLqA~~~~~~-~~~~~~~yl~~~~~~ 85 (235)
T PRK08084 44 HSGYIYLWGREGAGRSHLLHAACAELS-QRGDAVGYVPLDKRA 85 (235)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHH-CCCCCEEEEEHHHHH
T ss_conf 987699989999888999999999997-079857998779866