HHsearch alignment for GI: 254780615 and conserved domain: PRK08939
>PRK08939 primosomal protein DnaI; Reviewed.
Probab=91.06 E-value=0.5 Score=25.62 Aligned_cols=56 Identities=29% Similarity=0.420 Sum_probs=35.8
Q ss_pred CCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHC
Q ss_conf 0235570215410036756666248999999988505788526876216434599999985424
Q gi|254780615|r 140 IDLISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDS 203 (478)
Q Consensus 140 ID~l~pig~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~ 203 (478)
T Consensus 148 ~~~y~~~~~~kGlyl~G~~G~GKTyL~~aian~La~~-g~~v~~v~-------~p~~~~~lK~s 203 (306)
T PRK08939 148 LEAYKPGEKVKGLYLYGDFGVGKTYLLAAIANELAKK-GVSSTLVH-------FPEFIRELKNA 203 (306)
T ss_pred HHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC-CCEEEEEE-------HHHHHHHHHHH
T ss_conf 9973769888778898999998999999999999986-99299987-------59999999998