HHsearch alignment for GI: 254780615 and conserved domain: PRK09473
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional.
Probab=95.67 E-value=0.0067 Score=37.91 Aligned_cols=55 Identities=16% Similarity=0.331 Sum_probs=38.8
Q ss_pred CCCCCCHHHCCCCCCCCC---CCCCCCCC-CCCCCCCCEECCCCCCCCHHHHHHHHHHH
Q ss_conf 454441000013420002---31100235-57021541003675666624899999998
Q gi|254780615|r 118 QPSPSYTEQSTDASILTT---GIKVIDLI-SPYQKGGKIGLFGGAGVGKTVLIMELINN 172 (478)
Q Consensus 118 ~~~p~~~~R~~i~e~L~T---GIkaID~l-~pig~Gqr~gIfgg~GvGKT~l~~~~i~n 172 (478)
T Consensus 7 ~~~pplLeV~nL~v~f~~~~g~v~av~~Vsf~i~~GEilgivGeSGsGKSTl~~~i~gl 65 (330)
T PRK09473 7 ATVPLLLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGL 65 (330)
T ss_pred CCCCCEEEEECEEEEECCCCCCEEEEECCEEEECCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf 99884799956599964899528986674768889989999868987799999999768