HHsearch alignment for GI: 254780615 and conserved domain: PRK12422
>PRK12422 chromosomal replication initiation protein; Provisional.
Probab=97.00 E-value=0.005 Score=38.74 Aligned_cols=105 Identities=23% Similarity=0.322 Sum_probs=57.6
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 00367566662489999999885057885268762164345999999854244200122234443323169997176689
Q gi|254780615|r 152 IGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEP 231 (478)
Q Consensus 152 ~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~ 231 (478)
T Consensus 144 LfIyG~~GlGKTHLL~AIgn~i~-~~-~~kV~Yvtae------~F~~~~v~ai~--------------~--------~~- 192 (455)
T PRK12422 144 IYLFGPEGSGKTHLMQAAVSALR-ES-GGKILYVSSE------LFTEHLVSAIR--------------S--------GE- 192 (455)
T ss_pred EEEECCCCCCHHHHHHHHHHHHH-CC-CCEEEEECHH------HHHHHHHHHHH--------------C--------CC-
T ss_conf 58878999978999999999853-79-9869997499------99999999997--------------5--------88-
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHH-----------------HHHHHHHHHHCCCCHHHHCCHHHHHHH
Q ss_conf 678777777787768999866996799971559998-----------------760124553114410110122356665
Q gi|254780615|r 232 PGARSRVALTGLTVAEHFRDQGQDVLFFVDNIFRFT-----------------QANSEISALLGRIPSAVGYQSTLALEM 294 (478)
Q Consensus 232 ~~~r~~~~~~a~tiAEyfrd~g~dVll~~Dsltr~a-----------------~A~rEisl~~g~~P~~~gYp~~~f~~~ 294 (478)
T Consensus 193 -~~~F---------r~~yr--~~DvLLI-DDIQfl~gK~~tqeEff~tfN~L~~~~KQIVitsDr~P~----------el 249 (455)
T PRK12422 193 -MQRF---------RSFYR--NVDALFI-EDIEVFSGKGATQEEFFHTFNSLHTEGKLIVISSSYAPG----------DL 249 (455)
T ss_pred -HHHH---------HHHHH--CCCEEEE-EHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHH----------HH
T ss_conf -9999---------99996--3887763-147887284889999999999999859969996898957----------65
Q ss_pred HHHHHHHC-CCCCCCEE
Q ss_conf 78887631-77765325
Q gi|254780615|r 295 GELQERIT-TTLKGSIT 310 (478)
Q Consensus 295 ~~l~ERag-~~~~GSIT 310 (478)
T Consensus 250 ~~l~~RL~SRf~~GL~v 266 (455)
T PRK12422 250 KAMEERLISRFEWGIAI 266 (455)
T ss_pred HHHHHHHHHHHHCCEEE
T ss_conf 12689999886376132