HHsearch alignment for GI: 254780615 and conserved domain: PRK12422

>PRK12422 chromosomal replication initiation protein; Provisional.
Probab=97.00  E-value=0.005  Score=38.74  Aligned_cols=105  Identities=23%  Similarity=0.322  Sum_probs=57.6

Q ss_pred             EECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf             00367566662489999999885057885268762164345999999854244200122234443323169997176689
Q gi|254780615|r  152 IGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEP  231 (478)
Q Consensus       152 ~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~  231 (478)
T Consensus       144 LfIyG~~GlGKTHLL~AIgn~i~-~~-~~kV~Yvtae------~F~~~~v~ai~--------------~--------~~-  192 (455)
T PRK12422        144 IYLFGPEGSGKTHLMQAAVSALR-ES-GGKILYVSSE------LFTEHLVSAIR--------------S--------GE-  192 (455)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHH-CC-CCEEEEECHH------HHHHHHHHHHH--------------C--------CC-
T ss_conf             58878999978999999999853-79-9869997499------99999999997--------------5--------88-


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHH-----------------HHHHHHHHHHCCCCHHHHCCHHHHHHH
Q ss_conf             678777777787768999866996799971559998-----------------760124553114410110122356665
Q gi|254780615|r  232 PGARSRVALTGLTVAEHFRDQGQDVLFFVDNIFRFT-----------------QANSEISALLGRIPSAVGYQSTLALEM  294 (478)
Q Consensus       232 ~~~r~~~~~~a~tiAEyfrd~g~dVll~~Dsltr~a-----------------~A~rEisl~~g~~P~~~gYp~~~f~~~  294 (478)
T Consensus       193 -~~~F---------r~~yr--~~DvLLI-DDIQfl~gK~~tqeEff~tfN~L~~~~KQIVitsDr~P~----------el  249 (455)
T PRK12422        193 -MQRF---------RSFYR--NVDALFI-EDIEVFSGKGATQEEFFHTFNSLHTEGKLIVISSSYAPG----------DL  249 (455)
T ss_pred             -HHHH---------HHHHH--CCCEEEE-EHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHH----------HH
T ss_conf             -9999---------99996--3887763-147887284889999999999999859969996898957----------65


Q ss_pred             HHHHHHHC-CCCCCCEE
Q ss_conf             78887631-77765325
Q gi|254780615|r  295 GELQERIT-TTLKGSIT  310 (478)
Q Consensus       295 ~~l~ERag-~~~~GSIT  310 (478)
T Consensus       250 ~~l~~RL~SRf~~GL~v  266 (455)
T PRK12422        250 KAMEERLISRFEWGIAI  266 (455)
T ss_pred             HHHHHHHHHHHHCCEEE
T ss_conf             12689999886376132