HHsearch alignment for GI: 254780615 and conserved domain: PRK13537
>PRK13537 lipooligosaccharide transporter ATP-binding subunit; Provisional.
Probab=92.99 E-value=0.042 Score=32.68 Aligned_cols=48 Identities=31% Similarity=0.382 Sum_probs=33.3
Q ss_pred CCCCC-CCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 11002-3557021541003675666624899999998850578852687
Q gi|254780615|r 137 IKVID-LISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFA 184 (478)
Q Consensus 137 IkaID-~l~pig~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~ 184 (478)
T Consensus 18 ~~al~~vs~~V~~Gei~gllGpNGAGKTTli~~l~Gl~~p~sG~v~i~G 66 (304)
T PRK13537 18 KLVVDGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGLTHPDAGTISLCG 66 (304)
T ss_pred EEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC
T ss_conf 9998371778869959999999897299999999779568976899999