HHsearch alignment for GI: 254780615 and conserved domain: PRK13830
>PRK13830 conjugal transfer protein TrbE; Provisional.
Probab=90.89 E-value=0.26 Score=27.44 Aligned_cols=46 Identities=26% Similarity=0.358 Sum_probs=29.7
Q ss_pred CCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf 4100367566662489999999885057885268762164345999999
Q gi|254780615|r 150 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYH 198 (478)
Q Consensus 150 qr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~ 198 (478)
T Consensus 457 GHtlIiGpTGsGKTvll~fl~aq~~ky-~~~~vf~FD--Kd~s~~i~~~ 502 (818)
T PRK13830 457 GHTLIFGPTGSGKSTLLALIAAQFRRY-AGAQIFAFD--KGRSMLPLTL 502 (818)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHC-CCCEEEEEC--CCCCHHHHHH
T ss_conf 505898999998899999999998642-798389974--8876899999