HHsearch alignment for GI: 254780615 and conserved domain: PTZ00035
>PTZ00035 Rad51; Provisional.
Probab=96.17 E-value=0.017 Score=35.20 Aligned_cols=131 Identities=18% Similarity=0.166 Sum_probs=75.7
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCCCCCCC--CCCCEECCCCCCCCHHHHHHHHHHHHHH--CC---CCCEEEEEE-----
Q ss_conf 54441000013420002311002355702--1541003675666624899999998850--57---885268762-----
Q gi|254780615|r 119 PSPSYTEQSTDASILTTGIKVIDLISPYQ--KGGKIGLFGGAGVGKTVLIMELINNVAK--AH---GGYSVFAGV----- 186 (478)
Q Consensus 119 ~~p~~~~R~~i~e~L~TGIkaID~l~pig--~Gqr~gIfgg~GvGKT~l~~~~i~n~~~--~~---~~v~V~~~i----- 186 (478)
T Consensus 98 ta~~~~~~R~~~~~itTGs~~LD~LLGGGiet~sITEi~Ge~gsGKTQlChqLaV~~QLP~~~GG~~GkvvYIDTEgtFr 177 (350)
T PTZ00035 98 NAIDYHDARQNLIKFTTGSKQLDRLLKGGIETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWIDTEGTFR 177 (350)
T ss_pred CHHHHHHHHHHCEEECCCCHHHHHHHCCCEECCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHCCCCCCEEEEECCCCCC
T ss_conf 19999999864603575857888762789413858789727989789999999999048577779886279996889987
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHH
Q ss_conf 16434599999985424420012223444332316999717668967877777778776899986699679997155999
Q gi|254780615|r 187 GERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVALTGLTVAEHFRDQGQDVLFFVDNIFRF 266 (478)
Q Consensus 187 GER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~r~~~~~~a~tiAEyfrd~g~dVll~~Dsltr~ 266 (478)
T Consensus 178 peRi~qIA~~~-------------gld~~~vL~nI~~ara-~n~ehq~~ll------~~~~~~~~e~~vrLlIVDSital 237 (350)
T PTZ00035 178 PERIVAIAKRY-------------GLHPTDCLNNIAYAKA-YNCDHQTELL------IDASAMMADARFALLIVDSATAL 237 (350)
T ss_pred HHHHHHHHHHC-------------CCCHHHHHHHEEEEEE-CCHHHHHHHH------HHHHHHHHCCCEEEEEEHHHHHH
T ss_conf 89999999870-------------9997998533223220-6878899999------99999851167589985445667
Q ss_pred HHH
Q ss_conf 876
Q gi|254780615|r 267 TQA 269 (478)
Q Consensus 267 a~A 269 (478)
T Consensus 238 FR~ 240 (350)
T PTZ00035 238 YRS 240 (350)
T ss_pred HHH
T ss_conf 665