>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..

Probab=94.01 E-value=0.042 Score=32.67 Aligned_cols=136 Identities=20% Similarity=0.383 Sum_probs=76.0 Q ss_pred CCCCCCCC-CC---CEECCCCCCCCHHHHHHHHHHHHHH---CCCCC-E--EEEEECCCHHHHHHHHHHHHHCCCCCCCC Q ss_conf 23557021-54---1003675666624899999998850---57885-2--68762164345999999854244200122 Q gi|254780615|r 141 DLISPYQK-GG---KIGLFGGAGVGKTVLIMELINNVAK---AHGGY-S--VFAGVGERTREGNDLYHEMIDSKVNIDPR 210 (478) Q Consensus 141 D~l~pig~-Gq---r~gIfgg~GvGKT~l~~~~i~n~~~---~~~~v-~--V~~~iGER~rEv~e~~~e~~~~~~~~~~~ 210 (478) T Consensus 31 ~~L~~~l~PG~~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~~NC~~-~~T~y~~~~~L---------- 99 (383) T TIGR02928 31 KALRPILRPGSRPSNIFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVYINCQI-LDTSYQVLVEL---------- 99 (383) T ss_pred HHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC-CCCHHHHHHHH---------- T ss_conf 9988750674898725887888987889999999999998622699715899977854-68469999999---------- Q ss_pred CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH------H-C-CCCEEEEEECHHHHHHHHHHHHHHHCCCCH Q ss_conf 2344433231699971766896787777777877689998------6-6-996799971559998760124553114410 Q gi|254780615|r 211 KNNGSAVGSKCSLLYGQMNEPPGARSRVALTGLTVAEHFR------D-Q-GQDVLFFVDNIFRFTQANSEISALLGRIPS 282 (478) Q Consensus 211 ~~~~~~~~~~tv~v~~~~~~~~~~r~~~~~~a~tiAEyfr------d-~-g~dVll~~Dsltr~a~A~rEisl~~g~~P~ 282 (478) T Consensus 100 --------------~~~ln-~~~~~~~vP~tG~s~~~~~~~l~~~l~~~~~~~~~ivLDEiD~Lv~~~~-------d~P- 156 (383) T TIGR02928 100 --------------ANQLN-RRGSGEEVPTTGLSTSEVFRELYKELNRERGDSLIIVLDEIDKLVRKDD-------DDP- 156 (383) T ss_pred --------------HHHHC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCC-------CCH- T ss_conf --------------99851-5778888988778789999999999832018879998623102215888-------880- Q ss_pred HHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEE Q ss_conf 11012235666578887631777653256665 Q gi|254780615|r 283 AVGYQSTLALEMGELQERITTTLKGSITSVQA 314 (478) Q Consensus 283 ~~gYp~~~f~~~~~l~ERag~~~~GSIT~~~t 314 (478) T Consensus 157 --AyS~-~LY~L~Ra~~-~~~~~~~~vgvIgI 184 (383) T TIGR02928 157 --AYSK-LLYQLSRARE-NGDLENAKVGVIGI 184 (383) T ss_pred --HHHH-HHHHHHHHHH-CCCCCCCCEEEEEE T ss_conf --7878-8534331000-35778853489998

HHsearch alignment for GI: 254780615 and conserved domain: TIGR02928