HHsearch alignment for GI: 254780615 and conserved domain: TIGR03522
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=92.79 E-value=0.053 Score=32.02 Aligned_cols=47 Identities=23% Similarity=0.391 Sum_probs=32.4
Q ss_pred CCCCC-CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 10023-5570215410036756666248999999988505788526876
Q gi|254780615|r 138 KVIDL-ISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG 185 (478)
Q Consensus 138 kaID~-l~pig~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~~ 185 (478)
T Consensus 16 ~al~~vsf~v~~Gei~gllGpNGAGKTTl~~~l~Gl~~-p~~G~i~i~G 63 (301)
T TIGR03522 16 NALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP-PDSGSVQVCG 63 (301)
T ss_pred EEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCC-CCCCEEEECC
T ss_conf 99736067885981999999999819999999967956-8977799927