HHsearch alignment for GI: 254780615 and conserved domain: cd01854
>cd01854 YjeQ_engC YjeQ/EngC. YjeQ (YloQ in Bacillus subtilis) represents a protein family whose members are broadly conserved in bacteria and have been shown to be essential to the growth of E. coli and B. subtilis. Proteins of the YjeQ family contain all sequence motifs typical of the vast class of P-loop-containing GTPases, but show a circular permutation, with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases. All YjeQ family proteins display a unique domain architecture, which includes an N-terminal OB-fold RNA-binding domain, the central permuted GTPase domain, and a zinc knuckle-like C-terminal cysteine domain. This domain architecture suggests a role for YjeQ as a regulator of translation.
Probab=91.84 E-value=0.041 Score=32.72 Aligned_cols=32 Identities=41% Similarity=0.631 Sum_probs=26.9
Q ss_pred CCCCCCCCCCCCEECCCCCCCCHHHHHHHHHH
Q ss_conf 02355702154100367566662489999999
Q gi|254780615|r 140 IDLISPYQKGGKIGLFGGAGVGKTVLIMELIN 171 (478)
Q Consensus 140 ID~l~pig~Gqr~gIfgg~GvGKT~l~~~~i~ 171 (478)
T Consensus 152 ~~~L~~~l~~k~~v~~G~SGvGKSSLiN~L~~ 183 (287)
T cd01854 152 LDELREYLKGKTSVLVGQSGVGKSTLINALLP 183 (287)
T ss_pred HHHHHHHHCCCEEEEECCCCCCHHHHHHHHCC
T ss_conf 89999874798899988998888999987462