HHsearch alignment for GI: 254780615 and conserved domain: cd03221
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=93.93 E-value=0.023 Score=34.37 Aligned_cols=30 Identities=30% Similarity=0.544 Sum_probs=25.2
Q ss_pred CCCCCCCCCEECCCCCCCCHHHHHHHHHHH
Q ss_conf 557021541003675666624899999998
Q gi|254780615|r 143 ISPYQKGGKIGLFGGAGVGKTVLIMELINN 172 (478)
Q Consensus 143 l~pig~Gqr~gIfgg~GvGKT~l~~~~i~n 172 (478)
T Consensus 20 s~~i~~ge~~~l~G~NGsGKTTl~~~l~G~ 49 (144)
T cd03221 20 SLTINPGDRIGLVGRNGAGKSTLLKLIAGE 49 (144)
T ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 899879999999989998499999998489