HHsearch alignment for GI: 254780615 and conserved domain: cd03235
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=94.99 E-value=0.0097 Score=36.83 Aligned_cols=40 Identities=20% Similarity=0.378 Sum_probs=29.8
Q ss_pred CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 5570215410036756666248999999988505788526
Q gi|254780615|r 143 ISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSV 182 (478)
Q Consensus 143 l~pig~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V 182 (478)
T Consensus 19 s~~i~~Ge~~~liGpNGaGKSTllk~i~Gl~~p~~G~i~i 58 (213)
T cd03235 19 SFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRV 58 (213)
T ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf 7898599899999999986999999997687889758999