HHsearch alignment for GI: 254780615 and conserved domain: cd03254
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.94 E-value=0.012 Score=36.34 Aligned_cols=31 Identities=29% Similarity=0.447 Sum_probs=25.6
Q ss_pred CCCCCCCCCCEECCCCCCCCHHHHHHHHHHH
Q ss_conf 3557021541003675666624899999998
Q gi|254780615|r 142 LISPYQKGGKIGLFGGAGVGKTVLIMELINN 172 (478)
Q Consensus 142 ~l~pig~Gqr~gIfgg~GvGKT~l~~~~i~n 172 (478)
T Consensus 22 inl~i~~Ge~vaivG~sGsGKSTLl~ll~gl 52 (229)
T cd03254 22 INFSIKPGETVAIVGPTGAGKTTLINLLMRF 52 (229)
T ss_pred EEEEECCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf 2999879999999999998099999999668