HHsearch alignment for GI: 254780615 and conserved domain: cd03261
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.10 E-value=0.012 Score=36.20 Aligned_cols=43 Identities=16% Similarity=0.356 Sum_probs=30.2
Q ss_pred CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 23557021541003675666624899999998850578852687
Q gi|254780615|r 141 DLISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFA 184 (478)
Q Consensus 141 D~l~pig~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~ 184 (478)
T Consensus 18 ~isl~i~~Ge~~~iiG~SGsGKSTll~~i~gL-~~p~~G~I~~~ 60 (235)
T cd03261 18 GVDLDVRRGEILAIIGPSGSGKSTLLRLIVGL-LRPDSGEVLID 60 (235)
T ss_pred CEEEEECCCCEEEEECCCCCHHHHHHHHHHCC-CCCCCCEEEEC
T ss_conf 60648879989999999997299999999759-99898589999