HHsearch alignment for GI: 254780615 and conserved domain: pfam00931

Probab=96.92  E-value=0.004  Score=39.40  Aligned_cols=90  Identities=17%  Similarity=0.258  Sum_probs=49.8

Q ss_pred             CEECCCCCCCCHHHHHHHHHHHHH-HCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCC
Q ss_conf             100367566662489999999885-0578852687621643459999998542442001222344433231699971766
Q gi|254780615|r  151 KIGLFGGAGVGKTVLIMELINNVA-KAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMN  229 (478)
Q Consensus       151 r~gIfgg~GvGKT~l~~~~i~n~~-~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~  229 (478)
T Consensus        21 vI~I~G~gGiGKTtLA~~v~~~~~i~~~F~~~~wv~vs~~~-~~~~i~~~i~~~l~~------------~-~---~~~~~   83 (285)
T pfam00931        21 VVGIVGMGGVGKTTLAKQIYNDDSVGGHFDSVAWVVVSKTY-TEFRLQKDILQELGL------------D-D---SDWVE   83 (285)
T ss_pred             EEEEECCCCCCHHHHHHHHHCCHHHHHCCCEEEEEEECCCC-CHHHHHHHHHHHHCC------------C-C---CCCCC
T ss_conf             99988999563999999997165565059838999979766-689999999998566------------6-5---45555


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHH
Q ss_conf             896787777777877689998669967999715599
Q gi|254780615|r  230 EPPGARSRVALTGLTVAEHFRDQGQDVLFFVDNIFR  265 (478)
Q Consensus       230 ~~~~~r~~~~~~a~tiAEyfrd~g~dVll~~Dsltr  265 (478)
T Consensus        84 ~~~------~~l~~~l~~~L--~~kr~LiVLDDVw~  111 (285)
T pfam00931        84 KNE------SELAVKIKEAL--LRKRFLLVLDDVWE  111 (285)
T ss_pred             CCH------HHHHHHHHHHH--CCCCEEEEECCCCC
T ss_conf             789------99999999997--27966999638887