RPSBLAST alignment for GI: 254780615 and conserved domain: TIGR02546
>gnl|CDD|162913 TIGR02546, III_secr_ATP, type III secretion apparatus H+-transporting two-sector ATPase. Length = 422
Score = 194 bits (496), Expect = 3e-50
Identities = 128/450 (28%), Positives = 209/450 (46%), Gaps = 37/450 (8%)
Query: 7 TESVGRIQQIMGAVVDVVFVNSLPPIFSSLETSDKGSRIVFEVVQHLGEKTVRCIAMSRT 66
GR+ ++ G ++ V + + D + EVV G++ + +
Sbjct: 3 VRVRGRVTEVSGTLLKAVLPGARVGELCLIRRRDPSQLLA-EVVGFTGDEAL-LSPLGEL 60
Query: 67 DGLSRGDCVIDTGTQITVPVGEATLGRIMNVIGEPVDDQGAI--ISSEKRAIHQPSPSYT 124
G+S G VI TG +++ VGEA LGR+++ G P+D +G + E R + P
Sbjct: 61 HGISPGSEVIPTGRPLSIRVGEALLGRVLDGFGRPLDGKGELPAGEIETRPLDADPPPPM 120
Query: 125 EQSTDASILTTGIKVIDLISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFA 184
+ L TG++ ID + +G +IG+F GAGVGK+ L+ + A A +V A
Sbjct: 121 SRQPIDQPLPTGVRAIDGLLTCGEGQRIGIFAGAGVGKSTLLGMIARG-ASAD--VNVIA 177
Query: 185 GVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVALTGLT 244
+GER RE E I+ + + RK + L+ + P R + A T
Sbjct: 178 LIGERGREVR----EFIEHHLGEEGRK--------RSVLVVSTSDRPSLERLKAAYTATA 225
Query: 245 VAEHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERITTT 304
+AE+FRDQG+ VL +D++ RF +A EI G P+ GY ++ + L ER
Sbjct: 226 IAEYFRDQGKRVLLMMDSLTRFARALREIGLAAGEPPARGGYPPSVFSSLPRLLERAGNG 285
Query: 305 LKGSITSVQAIYVPADDLTDPAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSMLE 364
KGSIT++ + V DD+ DP + LD VLSR ++E+ YPAID L S S ++
Sbjct: 286 EKGSITALYTVLVEGDDMNDPIADEVRSILDGHIVLSRALAERNHYPAIDVLASLSRVMS 345
Query: 365 IDIVGQEHYDVARRVQEILQRYKSLQDIIAI----LGMDELSEEDKLVVARARKLERFMS 420
+V EH A +++ +L YK ++ +I + G D +++ + + + F+
Sbjct: 346 -QVVSTEHRRAAGKLRRLLATYKEVELLIRLGEYQPGSDPETDD---AIDKIDAIRAFLR 401
Query: 421 QPFHVAESFTGLPGKFVSLEETIRGFKGLV 450
Q + EET+ LV
Sbjct: 402 QSTDEYSPY----------EETLEQLHALV 421