RPSBLAST alignment for GI: 254780615 and conserved domain: TIGR03498
>gnl|CDD|163293 TIGR03498, FliI_clade3, flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively. Length = 418
Score = 191 bits (487), Expect = 4e-49
Identities = 119/403 (29%), Positives = 187/403 (46%), Gaps = 27/403 (6%)
Query: 39 SDKGSRIVFEVVQHLGEKTVRCIAMSRTDGLSRGDCVIDTGTQITVPVGEATLGRIMNVI 98
+ G ++ EVV V + +G+ G V + V + LGR++N +
Sbjct: 30 ARDGRPVLAEVVG-FNGDRVLLMPFEPLEGVGLGCAVFAREGPLAVRPHPSWLGRVINAL 88
Query: 99 GEPVDDQGAIISSEKR-AIHQPSPSYTEQSTDASILTTGIKVIDLISPYQKGGKIGLFGG 157
GEP+D +G + E+R + P ++ L TG++VID P +G ++G+F G
Sbjct: 89 GEPIDGKGPLPQGERRYPLRASPPPAMSRARVGEPLDTGVRVIDTFLPLCRGQRLGIFAG 148
Query: 158 AGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGND-LYHEMIDSKVNIDPRKNNGSA 216
+GVGK+ L+ L N V A VGER RE + L ++ G
Sbjct: 149 SGVGKSTLLSMLARN---TDADVVVIALVGERGREVREFLEDDL-------------GEE 192
Query: 217 VGSKCSLLYGQMNEPPGARSRVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQANSEISAL 276
+ ++ +E P R + A T +AE+FRDQG+DVL +D++ RF A EI
Sbjct: 193 GLKRSVVVVATSDESPLMRRQAAYTATAIAEYFRDQGKDVLLLMDSVTRFAMAQREIGLA 252
Query: 277 LGRIPSAVGYQSTLALEMGELQER--ITTTLKGSITSVQAIYVPADDLTDPAPATSFTHL 334
G P A GY ++ E+ L ER KGSIT + + V DD +P L
Sbjct: 253 AGEPPVARGYTPSVFSELPRLLERAGPGAEGKGSITGIFTVLVDGDDHNEPVADAVRGIL 312
Query: 335 DATTVLSRQISEKGIYPAIDPLDSNSSMLEIDIVGQEHYDVARRVQEILQRYKSLQDIIA 394
D VL R I+E+G YPAI+ L S S L + E + RR++ +L RY+ +D+I
Sbjct: 313 DGHIVLDRAIAERGRYPAINVLAS-VSRLAPRVWSPEERKLVRRLRALLARYEETEDLIR 371
Query: 395 ILGMDELSEED-KLVVARARKLERFMSQ----PFHVAESFTGL 432
+ + S+ + + K+ F++Q P + + F L
Sbjct: 372 LGAYRKGSDPELDEAIRLVPKIYEFLTQGPDEPTSLQDPFADL 414