HHsearch alignment for GI: 254780616 and conserved domain: PRK13422

>PRK13422 F0F1 ATP synthase subunit gamma; Provisional.
Probab=100.00  E-value=0  Score=620.44  Aligned_cols=291  Identities=30%  Similarity=0.460  Sum_probs=256.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             98879999999987568999999999999999999999983023699999999999730157544210002443334325
Q gi|254780616|r    1 MTSLKEFKSRIHSVKETQKITEAMQLISVTKLRRAKEAIQNASSYQFHIKDFFMKCVVGEHFQEYPSPFVRGTGKDKVYL   80 (294)
Q Consensus         1 M~~lk~ik~RI~sv~~~~KITkaMkmVA~skl~ka~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (294)
T Consensus         1 Maslk~ik~RIkSVkst~KITkAMkmVAasKlrkaq~~~~~~rpY~~~~~~i~~~l~~--~~~~~~~p~l~~~~~-k~~~   77 (298)
T PRK13422          1 MSNAREIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNVTA--ASIDYPNPYLFDRDV-KRVG   77 (298)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH--CCCCCCCCCCCCCCC-CEEE
T ss_conf             9987999999998769999999999999999999999998515099999999999985--278877853135787-6279


Q ss_pred             EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHCCCCCCEEEEECCCCCCC-CHHHHHHHHHH
Q ss_conf             53114642442001147999999987653203885038887040379851023332011111477664-03688999997
Q gi|254780616|r   81 LVICTAEKGLCGGFNAQIIRFARDRIKEFIAEGKEIKLLIIGRKGYEGLRKEFSSMIIDSIELSSKKG-VDFVQAHGIAR  159 (294)
Q Consensus        81 ~IvitSDrGLCG~~Ns~i~k~~~~~i~~~~~~~~~~~l~~vGkKg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~I~~  159 (294)
T Consensus        78 ~IvitSDrGLCG~~Nsni~k~~~~~i~~~~~~~~~~~~~~iG~Kg~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  157 (298)
T PRK13422         78 YIVTSTDRGLCGGLNINLFKHVLKEIKNNIEDRVGVDVCVIGSKAENFFAKLKDVNIVATAHYNDKDKEGSIRAIGGAVK  157 (298)
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHH
T ss_conf             99975897533430268999999999988856980899997068899999835777467761378887456999999999


Q ss_pred             HHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCHH---HHH---HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             6557650678750588620113443222044204788735---422---1100365543224799678789999989999
Q gi|254780616|r  160 QITSLFTSNVFDLCFFIYSEFKSIIQQIPIISKIIPVDWS---QDL---EQKQQDILSVYRYESTLYSVLDDIVLRSISS  233 (294)
Q Consensus       160 ~l~~~~~~~~~d~v~iiYn~f~s~~~q~p~~~~llP~~~~---~~~---~~~~~~~~~~~~~Ep~~~~il~~l~~~yl~~  233 (294)
T Consensus       158 ~~~~~~~~~~~d~v~iiyn~F~s~~~q~~~~~~llPi~~~~~~~~~~~~~~~~~~~~~~y~fEp~~~~vL~~l~~~yl~~  237 (298)
T PRK13422        158 VMLDKFTAGEIDRLYMSSNQFVSTIKQRPRLQTLLPIQDIFSAEEIKANKEKATKGHWDYIYERDIEEVLNALCIRYIEA  237 (298)
T ss_pred             HHHHHHHCCCCCEEEEEECEEEEEEEEEEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             99999866888889997220266378535556504676422122201332001145667401889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             9999999999999999999999999989999999999999998988988999998525319
Q gi|254780616|r  234 RVFWIILENKASEVGARITAMDNATRNAGQMVDNLVLSYNRQRQMRITTELIEIIAGAEVV  294 (294)
Q Consensus       234 ~l~~alles~aSE~aaRm~AM~~At~Na~~~i~~L~l~~Nk~RQ~~IT~El~EIisGaeAl  294 (294)
T Consensus       238 ~iy~alles~aSE~aaRm~AM~~AT~NA~emi~~Ltl~yNr~RQa~IT~El~EIvsGaeAL  298 (298)
T PRK13422        238 QVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV  298 (298)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999999999999999999899839999999999999999998899999998677339