HHsearch alignment for GI: 254780616 and conserved domain: PRK13423
>PRK13423 F0F1 ATP synthase subunit gamma; Provisional.
Probab=100.00 E-value=0 Score=599.27 Aligned_cols=285 Identities=35% Similarity=0.561 Sum_probs=258.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 98879999999987568999999999999999999999983023699999999999730157544210002443334325
Q gi|254780616|r 1 MTSLKEFKSRIHSVKETQKITEAMQLISVTKLRRAKEAIQNASSYQFHIKDFFMKCVVGEHFQEYPSPFVRGTGKDKVYL 80 (294)
Q Consensus 1 M~~lk~ik~RI~sv~~~~KITkaMkmVA~skl~ka~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (294)
T Consensus 1 Maslk~ik~RI~Sv~st~kIT~AMkmVAasKlrkaq~~~~~~r~Y~~~i~~~l~~l~~~~--~~~~~~l~~~~~~~-~~l 77 (286)
T PRK13423 1 MASLKSIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAKKLGEVLASLAKSQ--DPDVHPLLQKREAG-KAL 77 (286)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC--CCCCCCHHCCCCCC-CEE
T ss_conf 997799999999987889999999999999999999999850729999999999998737--77544101057877-269
Q ss_pred EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
Q ss_conf 53114642442001147999999987653203885038887040379851023332011111477664036889999976
Q gi|254780616|r 81 LVICTAEKGLCGGFNAQIIRFARDRIKEFIAEGKEIKLLIIGRKGYEGLRKEFSSMIIDSIELSSKKGVDFVQAHGIARQ 160 (294)
Q Consensus 81 ~IvitSDrGLCG~~Ns~i~k~~~~~i~~~~~~~~~~~l~~vGkKg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~ 160 (294)
T Consensus 78 ~ivitSDrGLCG~fNs~i~k~~~~~i~~~~~~~~~~~l~~IG~Kg~~~l~~~~~-~~~~~~~~--~~~~~~~~a~~i~~~ 154 (286)
T PRK13423 78 LVVVTSDRGLCGGFNANLCKAAERFIKENGDEFDEISVLTVGRKGYEFLKNRHK-IYKNYGNI--LADLTYATAALLAQE 154 (286)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHCCCC-CHHHHCCC--CCCCCHHHHHHHHHH
T ss_conf 999956975533555999999999999876179738999861878999861586-03553266--789998999999999
Q ss_pred HHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55765067875058862011344322204420478873542211003655432247996787899999899999999999
Q gi|254780616|r 161 ITSLFTSNVFDLCFFIYSEFKSIIQQIPIISKIIPVDWSQDLEQKQQDILSVYRYESTLYSVLDDIVLRSISSRVFWIIL 240 (294)
Q Consensus 161 l~~~~~~~~~d~v~iiYn~f~s~~~q~p~~~~llP~~~~~~~~~~~~~~~~~~~~Ep~~~~il~~l~~~yl~~~l~~all 240 (294)
T Consensus 155 i~~~~~~~~~d~v~iiyn~f~s~~~q~~~~~~llP~~~~~~~---~~~~~~~~~~ep~~~~vl~~l~~~yl~~~ly~all 231 (286)
T PRK13423 155 VIEGYLAEEYDEVYLLYNAFRSVMTQDITLQQLLPITPEEAD---DDEYPPEYIYEPSKGELLAEILPKHIEVQIFKALL 231 (286)
T ss_pred HHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 998654588786999851233563463467870589821013---32356411058999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999999999989999999999999998988988999998525319
Q gi|254780616|r 241 ENKASEVGARITAMDNATRNAGQMVDNLVLSYNRQRQMRITTELIEIIAGAEVV 294 (294)
Q Consensus 241 es~aSE~aaRm~AM~~At~Na~~~i~~L~l~~Nk~RQ~~IT~El~EIisGaeAl 294 (294)
T Consensus 232 es~aSE~aaRm~AM~~At~Na~eli~~L~~~yNr~RQa~IT~El~EIvsGaeAl 285 (286)
T PRK13423 232 ESVASEHGARMTAMDSASKNATEMIGKLTLQYNRARQAAITTELMEIISGAESI 285 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999999999899859999999999999999999999999999889865