HHsearch alignment for GI: 254780616 and conserved domain: PRK13424
>PRK13424 F0F1 ATP synthase subunit gamma; Provisional.
Probab=100.00 E-value=0 Score=617.71 Aligned_cols=289 Identities=31% Similarity=0.514 Sum_probs=266.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 98879999999987568999999999999999999999983023699999999999730157544210002443334325
Q gi|254780616|r 1 MTSLKEFKSRIHSVKETQKITEAMQLISVTKLRRAKEAIQNASSYQFHIKDFFMKCVVGEHFQEYPSPFVRGTGKDKVYL 80 (294)
Q Consensus 1 M~~lk~ik~RI~sv~~~~KITkaMkmVA~skl~ka~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (294)
T Consensus 1 Maslk~ik~RI~Sv~st~KITkAMkmVAasKlrkaq~~~~~~r~Y~~~i~~~l~~l~~~--~~~~~~p~~~~~~~~~~~~ 78 (291)
T PRK13424 1 MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYDMLGDLASK--ADSSAHPLLEVREEIKTCG 78 (291)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC--CCCCCCCHHHCCCCCCEEE
T ss_conf 98879999999987489999999999999999999999996003999999999999851--8764440331246786289
Q ss_pred EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
Q ss_conf 53114642442001147999999987653203885038887040379851023332011111477664036889999976
Q gi|254780616|r 81 LVICTAEKGLCGGFNAQIIRFARDRIKEFIAEGKEIKLLIIGRKGYEGLRKEFSSMIIDSIELSSKKGVDFVQAHGIARQ 160 (294)
Q Consensus 81 ~IvitSDrGLCG~~Ns~i~k~~~~~i~~~~~~~~~~~l~~vGkKg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~ 160 (294)
T Consensus 79 iIvitSDrGLCG~fNsni~k~~~~~i~~~~~~~~~~~l~~iG~Kg~~~~~~~~~~i~~~~~~~~~--~~~~~~a~~i~~~ 156 (291)
T PRK13424 79 IVLATSDRGLCGSFNANLISTALKLAKQKAAEGKTVKFYCVGKKGRDAIRKTDFEVVTALADQMG--SFDFQLANKIGLD 156 (291)
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHCCCCEEHHHCCCCC--CCCHHHHHHHHHH
T ss_conf 99982797554533099999999999988747982799996488899999759850014147778--9998999999999
Q ss_pred HHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55765067875058862011344322204420478873542211003655432247996787899999899999999999
Q gi|254780616|r 161 ITSLFTSNVFDLCFFIYSEFKSIIQQIPIISKIIPVDWSQDLEQKQQDILSVYRYESTLYSVLDDIVLRSISSRVFWIIL 240 (294)
Q Consensus 161 l~~~~~~~~~d~v~iiYn~f~s~~~q~p~~~~llP~~~~~~~~~~~~~~~~~~~~Ep~~~~il~~l~~~yl~~~l~~all 240 (294)
T Consensus 157 i~~~~~~~~~d~v~iiyn~f~s~~~q~~~~~~llPi~~~~~-~~~~~~~~~~~~~EP~~~~vl~~l~~~yl~~~ly~al~ 235 (291)
T PRK13424 157 VINAYLTGELDEVVLVYGEFVSMAKQLPITLPILPIAPKKE-DEAEAAPSKEYIYEPAVEGLLAELLPRFIKVQIYRGLL 235 (291)
T ss_pred HHHHHHCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99987558987389995300226546413687116886321-10003666433248888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999999999989999999999999998988988999998525319
Q gi|254780616|r 241 ENKASEVGARITAMDNATRNAGQMVDNLVLSYNRQRQMRITTELIEIIAGAEVV 294 (294)
Q Consensus 241 es~aSE~aaRm~AM~~At~Na~~~i~~L~l~~Nk~RQ~~IT~El~EIisGaeAl 294 (294)
T Consensus 236 es~aSE~~aRm~AM~~At~Na~e~i~~L~l~yNr~RQa~IT~EL~EIvsGaeAl 289 (291)
T PRK13424 236 DTSASEHAARMAAMDNATRSCDDMIGSLTLLFNKTRQASITRDLMDIVGGAEAL 289 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 989999999999999899979999999999999999998899999999879873